On 02/16/2011 03:08 PM, Adrian Johnson wrote:
> hi :
> has any one tried to graphically represent coverage data from
> sequencing on a chromosome. would you please share what packages you
> used to represent coverage graphically.
My own approach has been to write wrappers around lattice plotting
functions, down-sampling using successiveIRanges for instance to
the main features when getting a whole-genome view.
In some respects it seems like the most insightful visualizations will
not be of coverage per se but of derived statistics.
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