Hi All, Have you managed to find a cdf for the miRNA 3.0? I keep getting the error : "...cdf=miRNA-3_0 (??? affyids)..." When I spoke to Affymetrix they said that the 3.0 version doesn't have a .cdf and that a .cdf format wouldn't be compatible... They said I should use the 'xps' package on the bioconductor website together with a .pgf from their website. 'xps' doesn't work with Windows 7, which unfortunately is what I have. Can anyone help me? Thanks, Dana [[alternative HTML version deleted]]

You can use the oligo package. Everything should work automagically. b On 13 October 2012 05:56, Dana Most <danamost at="" gmail.com=""> wrote: > Hi All, > > Have you managed to find a cdf for the miRNA 3.0? > I keep getting the error : "...cdf=miRNA-3_0 (??? affyids)..." > > When I spoke to Affymetrix they said that the 3.0 version doesn't have a > .cdf and that a .cdf format wouldn't be compatible... > They said I should use the 'xps' package on the bioconductor website > together with a .pgf from their website. > 'xps' doesn't work with Windows 7, which unfortunately is what I have. > > Can anyone help me? > > Thanks, > > Dana > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor