pam implementation
1
0
Entering edit mode
@wolfgang-huber-3550
Last seen 12 weeks ago
EMBL European Molecular Biology Laborat…
John not sure what's your measure of "best", but the pamr package on CRAN is the one from the authors. Best wishes Wolfgang Il giorno Oct 29, 2012, alle ore 2:41 PM, John Lande <john.lande77 at="" gmail.com=""> ha scritto: > dear all, > > what is the best implementation in R or Bioconductor of the PAM algorithm > probosed by Tibshirani et colleague? > > best reguards > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor
pamr pamr • 1.4k views
ADD COMMENT
0
Entering edit mode
John Lande ▴ 280
@john-lande-2357
Last seen 10.2 years ago
thank you both for the answer. the point is that pamr lacks of a specific vignette as other bioc packages so I was wondering if it was discontinued somehow. is there around a tutorial that explains pipelines of analysis and functions? bests On Fri, Nov 2, 2012 at 7:42 PM, Wolfgang Huber <whuber@embl.de> wrote: > John > > not sure what's your measure of "best", but the pamr package on CRAN is > the one from the authors. > > Best wishes > Wolfgang > > Il giorno Oct 29, 2012, alle ore 2:41 PM, John Lande < > john.lande77@gmail.com> ha scritto: > > > dear all, > > > > what is the best implementation in R or Bioconductor of the PAM algorithm > > probosed by Tibshirani et colleague? > > > > best reguards > > > > [[alternative HTML version deleted]] > > > > _______________________________________________ > > Bioconductor mailing list > > Bioconductor@r-project.org > > https://stat.ethz.ch/mailman/listinfo/bioconductor > > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor > > [[alternative HTML version deleted]]
ADD COMMENT
0
Entering edit mode
Hi John, On 05/11/12 09:42, John Lande wrote: > thank you both for the answer. > > the point is that pamr lacks of a specific vignette as other bioc packages > so I was wondering if it was discontinued somehow. > > is there around a tutorial that explains pipelines of analysis and > functions? see here http://www-stat.stanford.edu/~tibs/PAM/Rdist/doc/readme.html HTH, J. > > bests > > On Fri, Nov 2, 2012 at 7:42 PM, Wolfgang Huber <whuber at="" embl.de=""> wrote: > >> John >> >> not sure what's your measure of "best", but the pamr package on CRAN is >> the one from the authors. >> >> Best wishes >> Wolfgang >> >> Il giorno Oct 29, 2012, alle ore 2:41 PM, John Lande < >> john.lande77 at gmail.com> ha scritto: >> >>> dear all, >>> >>> what is the best implementation in R or Bioconductor of the PAM algorithm >>> probosed by Tibshirani et colleague? >>> >>> best reguards >>> >>> [[alternative HTML version deleted]] >>> >>> _______________________________________________ >>> Bioconductor mailing list >>> Bioconductor at r-project.org >>> https://stat.ethz.ch/mailman/listinfo/bioconductor >>> Search the archives: >> http://news.gmane.org/gmane.science.biology.informatics.conductor >> >> > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor >
ADD REPLY

Login before adding your answer.

Traffic: 707 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6