Question: Useful information about Ensembl release 72 mart databases
gravatar for Thomas Maurel
4.9 years ago by
Thomas Maurel730
United Kingdom
Thomas Maurel730 wrote:
Dear all, The new Ensembl marts for release 72 are live on You can change your host to access our most recent data: mart <- useMart(biomart="ENSEMBL_MART_ENSEMBL", host="", path="/biomart/martservice") Ensembl Genes 72 Updated Human assembly to GRCh37.p11 Reinstated PolyPhen prediction and score filters and attributes Multiple chromosome names can now be selected in the region filter dropdown Added "clinical significance" attributes Added Agilent SurePrint GPL7083 4x44k and GPL16709 4x44k probes for Rabbit Ensembl Variation 72 Reinstated PolyPhen prediction and score filters and attributes Reinstated Pig (Sus scrofa) structural variation Added new variation species Gibbon (Nomascus leucogenys) Added a "variation citation" section in the "sequence variation" filter and attribute sections. Reinstated structural variation strains for Mouse A complete list of the changes in release 72 can be found at Best Regards, Thomas -- Thomas Maurel Bioinformatician - Ensembl Production Team European Bioinformatics Institute (EMBL-EBI) Wellcome Trust Genome Campus, Hinxton Cambridge - CB10 1SD - UK [[alternative HTML version deleted]]
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