Actually, it turns out that the mirror in Anhui does not contain a mirror of BioC 2.11. If it is feasible, you might consider upgrading to the release version of R (3.0.2) and Bioconductor (2.13). Then you would be able to use that mirror. Dan ----- Original Message ----- > From: "Dan Tenenbaum" <dtenenba at="" fhcrc.org=""> > To: "liyue [guest]" <guest at="" bioconductor.org=""> > Cc: "qvalue Maintainer" <jstorey at="" u.washington.edu="">, bioconductor at r-project.org > Sent: Thursday, January 2, 2014 8:15:38 AM > Subject: Re: [BioC] install qvalue > > Hi, > > You might try changing Bioconductor mirrors with the > chooseBioCmirror() command. > For users in China the mirror in Anhui usually works. > > Dan > > > ----- Original Message ----- > > From: "liyue [guest]" <guest at="" bioconductor.org=""> > > To: bioconductor at r-project.org, yueli7 at 126.com > > Cc: "qvalue Maintainer" <jstorey at="" u.washington.edu=""> > > Sent: Thursday, January 2, 2014 6:22:14 AM > > Subject: [BioC] install qvalue > > > > > > Hi, > > > > I try to install qvalue. > > > > > source("http://bioconductor.org/biocLite.R") > > A new version of Bioconductor is available after installing the > > most > > recent version of R; see http://bioconductor.org/install > > Bioconductor version 2.11 (BiocInstaller 1.8.3), ?biocLite for help > > > biocLite("qvalue") > > BioC_mirror: http://bioconductor.org > > Using Bioconductor version 2.11 (BiocInstaller 1.8.3), R version > > 2.15. > > Installing package(s) 'qvalue' > > ??????????????? > > 1: package ???qvalue??? is not available (for R version 2.15.1) > > 2: installed directory not writable, cannot update packages 'car', > > 'chron', > > 'colorspace', 'effects', 'Hmisc', 'lmtest', 'multcomp', > > 'mvtnorm', > > 'rgl', > > 'sandwich', 'sm', 'strucchange', 'XML', 'zoo', 'cluster', > > 'KernSmooth', > > 'lattice', 'Matrix', 'mgcv', 'nnet', 'rpart', 'survival' > > > > Thank you in advance for great help! > > > > Best, > > > > liyue > > > > -- output of sessionInfo(): > > > > > sessionInfo() > > R version 2.15.1 (2012-06-22) > > Platform: x86_64-pc-linux-gnu (64-bit) > > > > locale: > > [1] LC_CTYPE=zh_CN.UTF-8 LC_NUMERIC=C > > [3] LC_TIME=zh_CN.UTF-8 LC_COLLATE=zh_CN.UTF-8 > > [5] LC_MONETARY=zh_CN.UTF-8 LC_MESSAGES=zh_CN.UTF-8 > > [7] LC_PAPER=C LC_NAME=C > > [9] LC_ADDRESS=C LC_TELEPHONE=C > > [11] LC_MEASUREMENT=zh_CN.UTF-8 LC_IDENTIFICATION=C > > > > attached base packages: > > [1] stats graphics grDevices utils datasets methods > > base > > > > other attached packages: > > [1] BiocInstaller_1.8.3 > > > > loaded via a namespace (and not attached): > > [1] tools_2.15.1 > > > > > > -- > > Sent via the guest posting facility at bioconductor.org. > > > > _______________________________________________ > > Bioconductor mailing list > > Bioconductor at r-project.org > > https://stat.ethz.ch/mailman/listinfo/bioconductor > > Search the archives: > > http://news.gmane.org/gmane.science.biology.informatics.conductor > > > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor