Entering edit mode
Tommaso Raffaello
▴
60
@tommaso-raffaello-6470
Last seen 10.3 years ago
Dear Bioconductor users,
I´m using the package EasyqpcR to analyze my qPCR data.
Is there any way to extract the standard error calculation values
which
are given by the nrmData function and include them is a data frame for
example?
Also, if I include the slope calculation in a object ("efficiency")
and
use it in the nrmData function (....E=efficiency...) I get error.
"Error in Ops.data.frame(E1, (ctmeanall1 - ctmean1)) :
list of length 4 not meaningful"
I solve the thing by creating a data frame:
>efficiency_dataframe<-efficiency$Efficiency
and use it as argument in the nrmData function.
Is this the way to do?
Thanks for your help!
>sessionInfo()
R version 3.0.2 (2013-09-25)
Platform: x86_64-w64-mingw32/x64 (64-bit)
locale:
[1] LC_COLLATE=English_United Kingdom.1252 LC_CTYPE=English_United
Kingdom.1252
[3] LC_MONETARY=English_United Kingdom.1252 LC_NUMERIC=C
[5] LC_TIME=English_United Kingdom.1252
attached base packages:
[1] graphics grDevices utils datasets stats methods base
other attached packages:
[1] ggplot2_1.0.0 EasyqpcR_1.5.0
loaded via a namespace (and not attached):
[1] colorspace_1.2-4 digest_0.6.4 grid_3.0.2
gtable_0.1.2
[5] gWidgets_0.0-52 gWidgetsRGtk2_0.0-82 MASS_7.3-29
matrixStats_0.10.0
[9] munsell_0.4.2 plotrix_3.5-7 plyr_1.8.1
proto_0.3-10
[13] R.methodsS3_1.6.1 Rcpp_0.11.2 reshape2_1.4
RGtk2_2.20.29
[17] scales_0.2.4 stringr_0.6.2 tools_3.0.2
Tommaso
--
Tommaso Raffaello, PhD
University of Helsinki
Department of Forest Sciences
Latokartanonkaari 7 PO Box 27
00014 Helsinki (Finland)
Phone number: +358 504486086
email: tommaso.raffaello@helsinki.fi
email: tommaso.raffaello@gmail.com
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