I am hoping to conduct a weighted gene coexpression network analysis across four variables: two different tissue types and gender (M/F) for frogs. Which WGCNA tutorial from the site (http://labs.genetics.ucla.edu/horvath/CoexpressionNetwork/Rpackages/WGCNA/Tutorials/) do you suggest using as a guide? Will the package properly analyze my data if I have the RNA seq from a total of 28 samples, at 10 of one tissue type and 18 of the other tissue type? I worry that the minimum amount of samples needed at 15 is for EACH dataset, and not the collective whole amount.
Question: WGCNA Tutorial Selection
3.0 years ago by
ctruongctruong • 10
ctruongctruong • 10 wrote:
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