I am using R/Bioconductor by invoking

docker run -p 8787:8787 bioconductor/devel_base

and then I point my browser to

http://localhost:8787

to access RStudio.

It works without any problems.

But how can I access my raw data files and R-scripts on my local filesystem? I.e. how can I link my local filesystem to docker?

--

This is under Xubuntu 14.04.3 (xubuntu-14.04.3-desktop-amd64).

Read the relevant docker documentation. Also read what rocker has to say about permissions when doing this.