i have a txt file named mycounts.txt (rows are my 76 RNA-seq samples and columns are my geneids) containing the raw count of reads derived from RNA-seq experiments...i was going to use Netbenchmark (http://www.bioconductor.org/packages/release/bioc/html/netbenchmark.html), to infer GRN with embedded methods but i got error,
what i should replace in this code please?
top20.aupr <- netbenchmark(methods="all",datasources.names = "Toy",
datasets.num = 2,experiments = 40,
i know the R the least,,,i read the manual but really i could not find any clue. i really need your help because i don't know in my case what should be replaced in the script not to get error.