Hi all, I'm new to R and I'm currently going through the DESeq introduction guide by Anders and Huber entitled 'Di fferential expression of RNA-Seq data at the gene level.'
Simply, I have created a PCA plot using pasillaguide data:
print(plotPCA(vsdFull, intgroup=c("condition", "libType")))
My question is how do I produce a graph showing other eigenvectors like PC3 and PC4, ideally using DESeq and gplots.
All of my values and data correspond to the original guide so I'm hoping there is some simple code to use. Thanks in advance.