Dear All,
I am setting vignette using knitr package.
In DESCRIPTION file I added:
Suggests:
BiocStyle,
rmarkdown (>= 0.4.2),
testthat (>= 0.10.0),
rappdirs
VignetteBuilder: knitr
In Rmd file, I started by:
---
title: "bioCancer: Interactive Multi-OMICS Cancers Data Visualization and Analysis"
author: "\\
Karim Mezhoud (<kmezhoud@gmail.com>)\\
Nuclear Science Center of Tunisia, Nuclear Safety & Security Department"
date: "`r Sys.Date()`"
output:
BiocStyle::html_document:
toc: true
BiocStyle::pdf_document:
toc: true
vignette: >
%\VignetteIndexEntry{bioCancer: Interactive Multi-OMICS Cancers Data Visualization and Analysis}
%\VignetteEngine{knitr::rmarkdown}
%\VignetteDepends{AnnotationHub}
%\usepackage[utf8]{inputenc}
---
I am having this error:
* creating vignettes ... ERROR
Error: Vignette 'bioCancer.Rmd' is non-ASCII but has no declared encoding
Execution halted
Error: Command failed (1)
Execution halted
Exited with status 1.
Thanks
Karim
For the record, looks like this was asked (and answered?) on bioc-devel (which is, IMO, a more appropriate place for it).
https://stat.ethz.ch/pipermail/bioc-devel/2016-April/009080.html