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Question: "ALL" package under biocLite
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gravatar for mdfislam89
10 months ago by
mdfislam890
mdfislam890 wrote:

Hi,

I have problem loading the bioClite and the ALL data set under the package "ALL". Here comes these warining messages:

 

> biocLite("ALL")
BioC_mirror: https://bioconductor.org
Using Bioconductor 3.4 (BiocInstaller 1.24.0), R 3.3.2 (2016-10-31).
Installing package(s) ‘ALL’
installing the source package ‘ALL’

trying URL 'https://bioconductor.org/packages/3.4/data/experiment/src/contrib/ALL_1.16.0.tar.gz'
Content type 'application/x-gzip' length 11401988 bytes (10.9 MB)
downloaded 10.9 MB

\\jbvft\hf$\work\AKHSHA\Documents
CMD.EXE ble startet med banen ovenfor som standardmappe. UNC-baner
st›ttes ikke. Bruker Windows-mappen som standard.
\\jbvft\hf$\work\AKHSHA\DOCUME~1\R\R-33~1.2 gjenkjennes ikke som en intern eller ekstern kommando,
kj›rbart program eller satsvis fil.

The downloaded source packages are in
    ‘C:\Users\akhsha\AppData\Local\Temp\RtmpOmqn8o\downloaded_packages’
Warning messages:
1: running command '"//jbvft/hf$/work/AKHSHA/DOCUME~1/R/R-33~1.2/bin/i386/R" CMD INSTALL -l "\\jbvft\hf$\work\AKHSHA\Documents\R\R-3.3.2\library" C:\Users\akhsha\AppData\Local\Temp\RtmpOmqn8o/downloaded_packages/ALL_1.16.0.tar.gz' had status 1 
2: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘ALL’ had non-zero exit status

 

...Will be very kind of anyone can help me out of this.

 

fakhrul

R all
ADD COMMENTlink modified 10 months ago by Marcel Ramos ♦♦ 60 • written 10 months ago by mdfislam890
0
gravatar for Marcel Ramos
10 months ago by
Marcel Ramos ♦♦ 60
United States
Marcel Ramos ♦♦ 60 wrote:

Hi Fakhrul, 

Note: In the future please provide any error messages in English. 

It seems to be an issue with the mapping of your network drive. The message says that UNC paths are not supported. Please map the network drive to something that is recognizable by R (i.e., "E:\path\to\folder\" ). You should be able to find more information in the R-installation manual. You could also try the R-help or R-devel mailing lists. 

 

Best regards,

Marcel 

ADD COMMENTlink written 10 months ago by Marcel Ramos ♦♦ 60
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