"ALL" package under biocLite
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mdfislam89 • 0
@mdfislam89-11880
Last seen 4.9 years ago

Hi,

I have problem loading the bioClite and the ALL data set under the package "ALL". Here comes these warining messages:

 

> biocLite("ALL")
BioC_mirror: https://bioconductor.org
Using Bioconductor 3.4 (BiocInstaller 1.24.0), R 3.3.2 (2016-10-31).
Installing package(s) ‘ALL’
installing the source package ‘ALL’

trying URL 'https://bioconductor.org/packages/3.4/data/experiment/src/contrib/ALL_1.16.0.tar.gz'
Content type 'application/x-gzip' length 11401988 bytes (10.9 MB)
downloaded 10.9 MB

\\jbvft\hf$\work\AKHSHA\Documents
CMD.EXE ble startet med banen ovenfor som standardmappe. UNC-baner
st›ttes ikke. Bruker Windows-mappen som standard.
\\jbvft\hf$\work\AKHSHA\DOCUME~1\R\R-33~1.2 gjenkjennes ikke som en intern eller ekstern kommando,
kj›rbart program eller satsvis fil.

The downloaded source packages are in
    ‘C:\Users\akhsha\AppData\Local\Temp\RtmpOmqn8o\downloaded_packages’
Warning messages:
1: running command '"//jbvft/hf$/work/AKHSHA/DOCUME~1/R/R-33~1.2/bin/i386/R" CMD INSTALL -l "\\jbvft\hf$\work\AKHSHA\Documents\R\R-3.3.2\library" C:\Users\akhsha\AppData\Local\Temp\RtmpOmqn8o/downloaded_packages/ALL_1.16.0.tar.gz' had status 1 
2: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘ALL’ had non-zero exit status

 

...Will be very kind of anyone can help me out of this.

 

fakhrul

R ALL • 799 views
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Entering edit mode
@marcel-ramos-7325
Last seen 4 weeks ago
United States

Hi Fakhrul, 

Note: In the future please provide any error messages in English. 

It seems to be an issue with the mapping of your network drive. The message says that UNC paths are not supported. Please map the network drive to something that is recognizable by R (i.e., "E:\path\to\folder\" ). You should be able to find more information in the R-installation manual. You could also try the R-help or R-devel mailing lists. 

 

Best regards,

Marcel 

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