Cannot install anything through BiocManager::install()
1
0
Entering edit mode
Sasha • 0
@79685fdd
Last seen 5 weeks ago
Hong Kong

Hi everyone, I am using RStudio Version 1.4.1106. I wanted to install the "IsoformSwitchAnalyzeR" packages. The code I am using is as follows. I tried changing the cran, reinstalling R and Rstudio, the solutions from "https://stackoverflow.com/questions/6473831/readrdsfile-in-r" and nearly everything I can find online, but I still keep getting this warning.

What should I do? Thanks in advance.


if (!requireNamespace("BiocManager", quietly = TRUE)){
    install.packages("BiocManager")
}
BiocManager::install(version='devel')
BiocManager::install("IsoformSwitchAnalyzeR")

#I also tried:
if (!requireNamespace("devtools", quietly = TRUE)){
    install.packages("devtools")
}
devtools::install_github("kvittingseerup/IsoformSwitchAnalyzeR", build_vignettes = TRUE)

#But I keep getting this:
Error in readRDS(dest) : error reading from connection

sessionInfo( )
BiocManager • 107 views
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0
Entering edit mode
@kevin
Last seen 2 hours ago
Naas, Republic of Ireland

Hi, I believe the issue has been identified. Please see the answer here: Avoid upgrading BiocManager to 1.30.13; fix proposed

Kevin

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