Error in reading metharray sheet
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kwaku.anim • 0
@7d3f5701
Last seen 12 days ago

Please I need help with DNA methylation analysis. I am new to this and I would be grateful to get some help. After running

baseDir <- system.file("extdata", package = "C:/Users/Desktop/epic/iDat") targets <- read.metharray.sheet(baseDir)

the return is

baseDir <- system.file("extdata", package = "C:/Users/Desktop/epic/iDat") targets <- read.metharray.sheet(baseDir) Error in read.metharray.sheet(baseDir) : 'base' does not exists

I have saved the file as a .csv, read some recommendations and applied them but the problem still persists.

Please your kind suggestions/ help will be much appreciated. Thank you

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Basti ▴ 140
@7d45153c
Last seen 1 day ago
France

You are not downloading data from a package but from your own folder, so you only need baseDir = "C:/Users/Desktop/epic/iDat"