EPIC ARRAY ANALYSIS
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nucasa • 0
@23f7cc2f
Last seen 6 weeks ago
Germany

I ran this following code using a small data and the sex was predicted but when I increased the number of data the sex prediction didn't work anymore. Can someone help me to figure out the problem with the following error. error appears after clicking sex_calc. Enter the body of text here

Sex Prediction

dir.create("Sex Prediction") GRset <- mapToGenome(RGSet) sex_calc <- getSex(GRset, cutoff = -2) GRset <- addSex(GRset, sex = sex_calc)

Error in do_one(nmeth) : NA/NaN/Inf in foreign function call (arg 1)

And I think Km_Cluster doesn't work.

minfiDataEPIC #SexPrediction minfi • 124 views
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You may have non numeric value in your sex_calc object, what is the output of head(sex_calc) ?

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