EPIC ARRAY ANALYSIS
0
0
Entering edit mode
nucasa • 0
@23f7cc2f
Last seen 2.5 years ago
Germany

I ran this following code using a small data and the sex was predicted but when I increased the number of data the sex prediction didn't work anymore. Can someone help me to figure out the problem with the following error. error appears after clicking sex_calc. Enter the body of text here

Sex Prediction

dir.create("Sex Prediction") GRset <- mapToGenome(RGSet) sex_calc <- getSex(GRset, cutoff = -2) GRset <- addSex(GRset, sex = sex_calc)

Error in do_one(nmeth) : NA/NaN/Inf in foreign function call (arg 1)

And I think Km_Cluster doesn't work.

minfiDataEPIC #SexPrediction minfi • 873 views
ADD COMMENT
0
Entering edit mode

You may have non numeric value in your sex_calc object, what is the output of head(sex_calc) ?

ADD REPLY

Login before adding your answer.

Traffic: 837 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6