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I am having difficulty with creating multiple heatmaps with the ComplexHeatmap package. When I run a script that contains code exactly lifted from the documentation (https://bioconductor.org/packages/release/bioc/vignettes/ComplexHeatmap/inst/doc/s3.a_list_of_heatmaps.html)...
... I get the error message:
Here is the output of sessionInfo(): R version 3.3.2 (2016-10-31) Platform: x86_64-apple-darwin13.4.0 (64-bit) Running under: macOS Sierra 10.12.2 locale: [1] en_CA.UTF-8/en_CA.UTF-8/en_CA.UTF-8/C/en_CA.UTF-8/en_CA.UTF-8 attached base packages: [1] grid stats graphics grDevices utils datasets base other attached packages: [1] ComplexHeatmap_1.12.0 loaded via a namespace (and not attached): [1] flexmix_2.3-13 Rcpp_0.12.9 cluster_2.0.5 [4] whisker_0.3-2 magrittr_1.5 fpc_2.1-10 [7] MASS_7.3-45 munsell_0.4.3 mclust_5.2.1 [10] colorspace_1.3-2 lattice_0.20-34 rjson_0.2.15 [13] plyr_1.8.4 prabclus_2.2-6 tools_3.3.2 [16] nnet_7.3-12 gtable_0.2.0 circlize_0.3.9 [19] class_7.3-14 modeltools_0.2-21 lazyeval_0.2.0 [22] assertthat_0.1 tibble_1.2 kernlab_0.9-25 [25] trimcluster_0.1-2 RColorBrewer_1.1-2 ggplot2_2.2.1 [28] GlobalOptions_0.0.10 dendextend_1.3.0 robustbase_0.92-7 [31] shape_1.4.2 DEoptimR_1.0-8 methods_3.3.2 [34] scales_0.4.1 diptest_0.75-7 stats4_3.3.2 [37] mvtnorm_1.0-5 GetoptLong_0.1.5 |