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745
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5
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Lucy
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60
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2
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2
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1.2k
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Felipe
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2
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3
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1.7k
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40
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Katharina
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3.7k
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James W. MacDonald
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3
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3.0 years ago • updated 2.9 years ago
chm
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290
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10
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2
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5
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Assa Yeroslaviz
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vanbelj
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2
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pthom010
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2
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Zuguang Gu
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6
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13k
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updated 4.9 years ago by
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290
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10
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2.0k
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3
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2
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3.2k
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updated 5.0 years ago by
Gordon Smyth
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6
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Zuguang Gu
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290
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AB
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110
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4.1k
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290
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8.6k
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1.1k
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20
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3
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3.4k
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2
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5.1k
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290
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40
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1.6k
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2
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1.9k
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200
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written 7.2 years ago by
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12
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14k
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290
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10
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5
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0
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3.0k
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670
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0
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2
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2.1k
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2
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AR3513
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0
2
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2
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1.7k
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8
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10k
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670
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150
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Replies
Comment: DiffBind - question on the use of filtered or unfiltered input data
by
sloperun3az
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Your essay was beneficial to me, and I found it to be very useful. Thank you for writing it. You give a wealth of knowledge that is not onl…
Comment: compute_fasta_digest does not match Salmon index hash
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sloperun3az
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The people who are reading your work are not taken into consideration, even though you appear to have a solid understanding of the subject …
Comment: parameters of filterByExpr
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Paul Harrison
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It might be worth trying limma-voom (or limma-trend) instead of a GLM based method. In our experience these are less prone to this problem.…
Comment: limma::voom vs edgeR::voomLmFit - when to use?
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Gordon Smyth
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voomLmFit() is in edgeR instead of limma because it needs to call edgeR::glmFit() internally to determine which of the zero observations al…
Comment: limma::voom vs edgeR::voomLmFit - when to use?
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Just wondering--why was this function put into `edgeR` rather than `limma`? Maybe a bit technical, but it is a little confusing from an out…
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