Showing : ComplexHeatmap • reset
2
votes
3
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272
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How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma heatmaps ComplexHeatmap
updated 4 months ago by ▴ 40 • written 4 months ago by ▴ 10
3
votes
4
replies
589
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ComplexHeatmap - Default distance and hierarchical clustering methods
ComplexHeatmap Complex
updated 4 months ago by ▴ 40 • written 4 months ago by • 0
2
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5
replies
580
views
ComplexHeatmap - z-score color coding failed
heatmaps ComplexHeatmap
5 months ago Katharina • 0
0
votes
1
reply
738
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Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R heatmaps ComplexHeatmap Heatma
updated 9 months ago by ▴ 240 • written 9 months ago by • 0
0
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0
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444
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Boxplot annotation per cluster and column using ComplexHeatmap
ComplexHeatmap
10 months ago gdeniz • 0
1
vote
1
reply
965
views
ComplexHeatmap: Change font size of annotation axis values
ComplexHeatmap
11 months ago nalaspina • 0
3
votes
3
replies
1.1k
views
ComplexHeatmap install error
ComplexHeatmap
updated 11 months ago by 63k • written 11 months ago by • 0
2
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3
replies
1.0k
views
Complexheatmap row-names not showing up
ComplexHeatmap
12 months ago • updated 11 months ago krushnach80 • 0
1
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1
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1.2k
views
ComplexHeatmap: Not able to change the annotations size of the heatmap
ComplexHeatmap Anno Annotation
updated 21 months ago by ▴ 240 • written 21 months ago by ▴ 10
1
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0
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687
views
ComplexHeatmap: Swapping between left_annotation and right_annotation results in a blank space
anno_block ComplexHeatmap left_annotation right_annotation
22 months ago glich • 0
2
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5
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1.9k
views
News: New in DiffBind 3.2: dba.plotProfile() - Peak profiles and profile heatmaps
profileplyr ATACSeq DiffBind ComplexHeatmap ChIPSeq
updated 5 months ago by • 0 • written 2.0 years ago by ★ 4.8k
3
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2
replies
1.3k
views
Complex Heatmap shows just one color
Heatmap ComplexHeatmap colorRamp
2.1 years ago Assa Yeroslaviz ★ 1.5k
0
votes
1
reply
756
views
ComplexHeatmap: setting column_order changes plotted values
ComplexHeatmap
2.2 years ago vanbelj ▴ 20
2
votes
4
replies
5.2k
views
Complexheatmap Installation Issue
ComplexHeatmap
2.4 years ago legro.melanie • 0
0
votes
0
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373
views
How to show rownames in densityheatmaps
ComplexHeatmap
2.5 years ago adR ▴ 30
0
votes
2
replies
728
views
K Means Clustering Two Matrices for ComplexHeatmap
complexheatmap R
2.7 years ago pthom010 • 0
0
votes
2
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8.3k
views
ComplexHeatmap - how to change the position of the legend of rowAnnotation
ComplexHeatmap
updated 2.9 years ago by ▴ 240 • written 2.9 years ago by • 0
1
vote
6
replies
6.9k
views
Change fontsize/remove name of annotation ComplexHeatmap package
r rnaseq complexHeatmap annotation
updated 3.0 years ago by ▴ 240 • written 3.0 years ago by ▴ 10
0
votes
1
reply
987
views
ComplexHeatmap's UpSet plots: how to convert a binary matrix into a list of sets
ComplexHeatmap UpSet
3.0 years ago moldach ▴ 20
3
votes
2
replies
1.3k
views
Clustering differentially expressed genes in response to multiple treatments (using edgeR)
edger complexheatmap R clustering
updated 3.1 years ago by 47k • written 3.1 years ago by • 0
0
votes
6
replies
3.6k
views
Error: node stack overflow when trying to plot large dataset using Complexheatmap
Complexheatmap
updated 3.7 years ago by ▴ 240 • written 3.7 years ago by ▴ 110
3
votes
7
replies
2.2k
views
Handle missing values in the z-score matrix while plotting heatmap in the ComplexHeatmap
matrix heatmap ComplexHeatmap missing values R
updated 3.7 years ago by ▴ 240 • written 3.7 years ago by ▴ 10
3
votes
2
replies
5.5k
views
ComplexHeatmap removes row labels if annotation is added
annotation show_row_names complexheatmap
3.9 years ago • updated 3.8 years ago alexw858 • 0
0
votes
1
reply
568
views
ComplexHeatmap : can't find the arguments inherited from the previous version
ComplexHeatmap
updated 4.1 years ago by ▴ 240 • written 4.1 years ago by ▴ 20
4
votes
3
replies
1.9k
views
Align legends to each heatmap in a ComplexHeatmap with 2 heatmaps
complexheatmap r
updated 4.1 years ago by ▴ 240 • written 4.1 years ago by ▴ 180
0
votes
1
reply
1.4k
views
ComplexHeatmap package will not display heatmaps
ComplexHeatmap software error
updated 4.1 years ago by 63k • written 4.1 years ago by • 0
2
votes
1
reply
2.9k
views
Make UpSet function display numbers above the bars
ComplexHeatmap
updated 4.2 years ago by ▴ 240 • written 4.3 years ago by ▴ 40
0
votes
1
reply
938
views
Error with ComplexHeatmap. Showing only part of image.
Complexheatmap
4.3 years ago Goku • 0
0
votes
2
replies
1.3k
views
ComplexHeatmap column dendrogram
complexheatmap
updated 5.2 years ago by ▴ 180 • written 5.3 years ago by 63k
5
votes
12
replies
7.0k
views
Combining ComplexHeatmap with other plot types
complexheatmap ggplot2
updated 5.5 years ago by ▴ 240 • written 5.5 years ago by ▴ 10
1
vote
5
replies
7.3k
views
How to add both row and column labels to Complexheatmap
complexheatmap labels
5.7 years ago dilawerkh4 • 0
0
votes
0
replies
1.2k
views
Problem with heatmap by ComplexHeatmap
complexheatmap Rstudio NOISeq
5.7 years ago Luiz • 0
0
votes
1
reply
1.3k
views
about using the names of the rows and columns in ComplexHeatmap
complexheatmap
5.7 years ago Bogdan ▴ 660
3
votes
2
replies
3.3k
views
Automatic color assignment for annotations on ComplexHeatmap
complexheatmap
5.7 years ago CodeAway ▴ 70
0
votes
0
replies
856
views
Changing row height in ComplexHeatmap
complexheatmap
updated 5.7 years ago by 47k • written 5.7 years ago by • 0
2
votes
3
replies
1.6k
views
about MAFTOOLS and ComplexHeatmap
complexheatmap maftools
updated 5.8 years ago by ▴ 80 • written 5.8 years ago by ▴ 660
0
votes
2
replies
1.4k
views
Extracting subclusters from original data
complexheatmap metabolomics
updated 5.9 years ago by ▴ 120 • written 5.9 years ago by • 0
0
votes
2
replies
1.7k
views
legend with gradient in ComplexHeatmap
complexheatmap
5.9 years ago AR3513 • 0
2
votes
2
replies
1.0k
views
about reshaping a data frame
maftools complexheatmap
updated 5.9 years ago by ▴ 110 • written 5.9 years ago by ▴ 660
0
votes
1
reply
1.2k
views
Oncoprint function in ComplexHeatmap
complexheatmap
6.0 years ago Bogdan ▴ 660
0
votes
5
replies
1.5k
views
Problem trying to decorate a heatmap inside a function
complexheatmap
6.1 years ago AR3513 • 0
0
votes
1
reply
869
views
Error in Heatmap...
complexheatmap
6.2 years ago baranikumar22 • 0
8
votes
1
reply
8.2k
views
extracting the genes associated with the clusters
heatmap.2 pheatmap complexheatmap heatplus
updated 6.2 years ago by ▴ 660 • written 6.2 years ago by ▴ 660
0
votes
1
reply
875
views
Drawing a HeatMapList while retaining the original row order of each heat map
complexheatmap
updated 6.3 years ago by 13k • written 6.3 years ago by ▴ 150
1
vote
2
replies
1.5k
views
Error when using multiple heatmaps in ComplexHeatmaps
ComplexHeatmap bug
6.4 years ago brt381 • 0
2
votes
1
reply
2.8k
views
Assign custom dendrogram to ComplexHeatmap Heatmap object
complexheatmap heatmap.2 dendrogram dendextend heatmap
updated 6.6 years ago by ▴ 180 • written 6.6 years ago by ▴ 660
0
votes
1
reply
1.2k
views
How to manage multiple legends in heatmap_legend_param (ComplexHeatmap) ?
ComplexHeatmap complexheatmap
6.7 years ago g.atla ▴ 10
3
votes
2
replies
15k
views
Plotting several heatmaps onto the same grid with the ComplexHeatmap package in R
complexheatmap
updated 6.7 years ago by ▴ 180 • written 6.7 years ago by ▴ 10
0
votes
1
reply
891
views
ComplexHeatmap Legend labels
complexheatmap
6.8 years ago vedran.franke • 0
3
votes
4
replies
5.2k
views
ComplexHeatmap - Annotation without a named vector
complexheatmap
updated 6.8 years ago by ▴ 180 • written 6.8 years ago by ▴ 360
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Comment: Adjusting for baseline when having longitudinal data, mixed model and no treat by Gordon Smyth 47k
limma already adjusts for the baseline expression level of each subject. Trying to include baseline expression explicitly in the linear mod…
Comment: Remove duplicate genera in DEseq output? by ATpoint ★ 2.9k
This seems to be very specific rather than a general and technical DESeq2 question. See the last point of https://support.bioconductor.org/…
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Hi @mike-smith , you are correct. I was trying to select the ones that have some GO annotations by using the `with_go` filter. I was confus…
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The point of the VST is to make the data systematically homoskedastic (that is, not systematic trend of variance over mean, but not e.g. fo…
Comment: How to update a package at Bioconductor by ma79 • 0
thanks, just informed the original maintainer to send an email.
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Using R package 'limma' on pre-normalized counts and the effect of non-equivalent reads/sample on limma linear model
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What can I do if I only have TPM but not raw counts data?
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