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I am trying to create a Seurat object using the package "Seurat". When I am reading my raw files using the function Read10X, I am getting this error- Error in dimnamesGets(x, value) : length of Dimnames[[1]] (45948) is not equal to Dim[1] (45947).
I am unsure how to resolve this issue.
RsessionInfo:
R version 4.1.2 (2021-11-01)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19044)
Matrix products: default
locale:
[1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252
[3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C
[5] LC_TIME=English_United States.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] sp_1.5-0 SeuratObject_4.1.1 Seurat_4.1.1 Matrix_1.5-1
loaded via a namespace (and not attached):
[1] nlme_3.1-153 spatstat.sparse_2.1-1 matrixStats_0.62.0 RcppAnnoy_0.0.19
[5] RColorBrewer_1.1-3 httr_1.4.4 sctransform_0.3.4 tools_4.1.2
[9] utf8_1.2.2 R6_2.5.1 irlba_2.3.5 rpart_4.1-15
[13] KernSmooth_2.23-20 uwot_0.1.14 mgcv_1.8-38 rgeos_0.5-9
[17] DBI_1.1.3 lazyeval_0.2.2 colorspace_2.0-3 tidyselect_1.1.2
[21] gridExtra_2.3 compiler_4.1.2 progressr_0.11.0 cli_3.4.0
[25] plotly_4.10.0 scales_1.2.1 lmtest_0.9-40 spatstat.data_2.2-0
[29] ggridges_0.5.3 pbapply_1.5-0 goftest_1.2-3 stringr_1.4.1
[33] digest_0.6.29 spatstat.utils_2.3-1 pkgconfig_2.0.3 htmltools_0.5.3
[37] parallelly_1.32.1 fastmap_1.1.0 htmlwidgets_1.5.4 rlang_1.0.5
[41] rstudioapi_0.14 shiny_1.7.2 generics_0.1.3 zoo_1.8-10
[45] jsonlite_1.8.0 spatstat.random_2.2-0 ica_1.0-3 dplyr_1.0.10
[49] magrittr_2.0.3 patchwork_1.1.2 Rcpp_1.0.9 munsell_0.5.0
[53] fansi_1.0.3 abind_1.4-5 reticulate_1.26 lifecycle_1.0.2
[57] stringi_1.7.6 MASS_7.3-54 Rtsne_0.16 plyr_1.8.7
[61] grid_4.1.2 parallel_4.1.2 listenv_0.8.0 promises_1.2.0.1
[65] ggrepel_0.9.1 deldir_1.0-6 miniUI_0.1.1.1 lattice_0.20-45
[69] cowplot_1.1.1 splines_4.1.2 tensor_1.5 pillar_1.8.1
[73] igraph_1.3.4 spatstat.geom_2.4-0 future.apply_1.9.1 reshape2_1.4.4
[77] codetools_0.2-18 leiden_0.4.3 glue_1.6.2 data.table_1.14.2
[81] png_0.1-7 vctrs_0.4.1 httpuv_1.6.6 polyclip_1.10-0
[85] gtable_0.3.1 RANN_2.6.1 purrr_0.3.4 spatstat.core_2.4-4
[89] tidyr_1.2.1 scattermore_0.8 future_1.28.0 assertthat_0.2.1
[93] ggplot2_3.3.6 mime_0.12 xtable_1.8-4 later_1.3.0
[97] survival_3.2-13 viridisLite_0.4.1 tibble_3.1.8 cluster_2.1.2
[101] globals_0.16.1 fitdistrplus_1.1-8 ellipsis_0.3.2 ROCR_1.0-11