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Comment: DESeq2: NA's in mcols(object)$betaConv
by
Nikolay Ivanov
•
0
Thank you for your reply!
So, I have 5060 genes with NA's in mcols(object)$betaConv. Yes, most of them (5035/5060) have all zero counts. T…
Comment: scater::calculatePCA error when using BPPARAM = MulticoreParam
by
doliv071
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0
Thanks Aaron,
I used `snowParam` as a workaround for the time being.
Regarding file-backed matrices, I was under the impression that `D…
Answer: DESeq2: NA's in mcols(object)$betaConv
by
Michael Love
33k
Re: Q1, do these have all zero counts?
If you run `vst(dds, blind=FALSE)` on a `dds` in which `DESeq()` has already been run, it will be…
Comment: DESeq2 - one groups with no replicates
by
SUMIT
•
0
I disturb you only because I thought why I am not getting an error like deprecated in v1.20 and no longer supported...... Anyway, Thank you…
Answer: How to convert .CEL file to .VCF file?
by
James W. MacDonald
57k
I don't know of anything within Bioconductor, but after a Google search for affy2vcf (hint), I came upon [this github repo][1].
[1]:…
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