Problem with loading rtracklayer
0
0
Entering edit mode
@7fe98ae2
Last seen 13 months ago
Canada

I have several problems with the rtracklayer package. I actually want to run library(recount), but then I encountered this error:

Error: package or namespace load failed for ‘recount’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/Users/janetzhang/Library/R/x86_64/4.2/library/rtracklayer/libs/rtracklayer.so':
  dlopen(/Users/janetzhang/Library/R/x86_64/4.2/library/rtracklayer/libs/rtracklayer.so, 6): Symbol not found: ___darwin_check_fd_set_overflow
  Referenced from: /Users/janetzhang/Library/R/x86_64/4.2/library/rtracklayer/libs/rtracklayer.so
  Expected in: /usr/lib/libSystem.B.dylib
 in /Users/janetzhang/Library/R/x86_64/4.2/library/rtracklayer/libs/rtracklayer.so

I think there is some problem with rtracklayer. I installed the rtracklayer successfully, but then, when I was trying to run library(rtracklayer), I have the same error:

Error: package or namespace load failed for ‘rtracklayer’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/Users/janetzhang/Library/R/x86_64/4.2/library/rtracklayer/libs/rtracklayer.so':
  dlopen(/Users/janetzhang/Library/R/x86_64/4.2/library/rtracklayer/libs/rtracklayer.so, 6): Symbol not found: ___darwin_check_fd_set_overflow
  Referenced from: /Users/janetzhang/Library/R/x86_64/4.2/library/rtracklayer/libs/rtracklayer.so
  Expected in: /usr/lib/libSystem.B.dylib
 in /Users/janetzhang/Library/R/x86_64/4.2/library/rtracklayer/libs/rtracklayer.so

I have the most updated R studio version and the Bioconductor for my labtop already. I am using macbook. Any suggestion?

rtracklayer • 705 views
ADD COMMENT

Login before adding your answer.

Traffic: 525 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6