Is there a way to keep in count of SNP polymorphisms that fall within the DMR in dmrseq ?

Many thanks, Giancarlo

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Hi Giancarlo,

There is no built-in functionality for this in dmrseq. However, if you have the coordinates of SNP polymorphisms identified form the data from an external tool, you could use GenomicRanges utilities to query which regions have overlap with these SNPs. Hope that helps!