Hi,

I am experiencing some problems with the beginning of the DNA methylation assay. After i load the dataset and the methylKit package, I am not able to use the getMethylationStats or getCoverageStats functions for some reason. I get this error, Error in (function (classes, fdef, mtable) unable to find function getMethylationStats for signature.

Anyone had this problem before?

Hi Krisztina,

usually those errors indicate that the objects used with the function are not of the correct class. In the case of getMethylationStats, this function expects a single methylRaw or methylRawDB object.

Best, Alex