Python Module from Kim and Volsky (2005) PAGE: Parametric Analysis of Gene Set Enrichment paper?
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@daniellenewby-12503
Last seen 7.4 years ago

Hi,

I was wondering if anyone knew where the python module is to carry out pathway analysis using the methods in the paper by Kim and Volsky (2005) in their paper "PAGE: Parametric Analysis of Gene Set Enrichment paper"? It is not clear if they produced a python module from the paper and if they did i have not been able to find it!

Any help would be great to point me in the right direction

Thanks

Danielle

GSEA PAGE microarray differential gene expression pathway analysis • 1.4k views
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Guido Hooiveld ★ 4.1k
@guido-hooiveld-2020
Last seen 1 day ago
Wageningen University, Wageningen, the …

FYI, since you ask at the Bioconductor forum: I know that the PAGE algorithm has been implemented in the package PGSEA.

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