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linzi12
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@linzi12-12794
Last seen 7.1 years ago
My installation of DESeq2 failed when a dependency, RCurl, failed to load after being built. This appears to be a fairly common error (see https://github.com/dmlc/mxnet/issues/771), but I haven't found a solution that works for me. Any suggestions are appreciated! The relevant error message, after running the command biocLite("DESeq2"), is provided below.
installing to /usr/local/lib/R/3.3/site-library/RCurl/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/usr/local/lib/R/3.3/site-library/RCurl/libs/RCurl.so':
dlopen(/usr/local/lib/R/3.3/site-library/RCurl/libs/RCurl.so, 6): Library not loaded: @rpath/libcurl.4.dylib
Referenced from: /usr/local/lib/R/3.3/site-library/RCurl/libs/RCurl.so
Reason: image not found
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/usr/local/lib/R/3.3/site-library/RCurl’