sangerseqR::read.abif reads float data incorrectly on little-endian systems
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Entering edit mode
@brendanfurneaux-13009
Last seen 13 months ago

The bug should affect reading SCF files also.

problem: UnExportedFunctions.R lines 60-61

f32 <- function(f, n=length(f)/4) readBin(f, what = "numeric", size = 4, n=n)
f64 <- function(f, n=length(f)/8) readBin(f, what = "numeric", size = 8, n=n)

solution:

f32 <- function(f, n=length(f)/4) readBin(f, what = "numeric", size = 4, n=n, endian = "big)
f64 <- function(f, n=length(f)/8) readBin(f, what = "numeric", size = 8, n=n, endian = "big")
sangerseqR bug • 478 views
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