Question

ChIPQC installation does not force latest DiffBind version

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Coby Viner ▴ 50

@coby-viner-10939

Last seen 3.6 years ago

University of Toronto, Canada

Upon installing the latest version of ChIPQC (1.12.1) in a new R 3.4.0 installation, I encountered a few different errors upon running ChIPQCreport. These various errors were all resolved, once I upgraded DiffBind to the latest version (2.4.4).

ChIPQC should therefore install the latest available version or try to upgrade any present versions upon installation.

chipqc diffbind chipqcreport • 1.3k views

ADD COMMENT • link updated 7.5 years ago by Thomas Carroll ▴ 420 • written 7.5 years ago by Coby Viner ▴ 50

score 1 · Answer 1 · 2017-06-13

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Thomas Carroll ▴ 420

@thomas-carroll-7019

Last seen 2.0 years ago

United States/New York/The Rockefeller …

hi Coby,

No worries, i'll do some digging.

thanks,

tom

ADD COMMENT • link 7.5 years ago Thomas Carroll ▴ 420

score 0 · Answer 2 · 2017-06-13

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Thomas Carroll ▴ 420

@thomas-carroll-7019

Last seen 2.0 years ago

United States/New York/The Rockefeller …

hi Coby,

So i can hunt this down. Could you tell me which version of Diffbind was installed before the update?

tom

ADD COMMENT • link 7.5 years ago Thomas Carroll ▴ 420

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Hi Tom,

Thanks for looking into this!

Unfortunately, I did not record that, so I am not entirely sure. I think that it may have been version 2.4.2 (the current system version), but it may have been a much earlier version from a previous installation of mine.

-- Coby

ADD REPLY • link 7.5 years ago Coby Viner ▴ 50