DEsubs problems with Mus musculus
0
0
Entering edit mode
Rtist • 0
@rtist-13256
Last seen 6.9 years ago

Hi everyone,

i used the DEsubs package to find subpathways related to a Mus Musculus RNA-Seq experiment. Using my differentially expressed genes, i get subpathways but when i use the "geneVisualization" function to view the topological measures concerning the genes, in the $measures.topological object the rows names are all NA values instead of getting the entrezid/symbol, the same happens for the graph bars. I encounter this error when using the Mus musculus entrezids. Has anyone encountered this problem?

Thanks.

 

DEsubs • 823 views
ADD COMMENT
0
Entering edit mode

After encountering a potential error, it would be helpful if you added the output of the function sessionInfo() to your question so we can more easily reproduce the problem.

ADD REPLY

Login before adding your answer.

Traffic: 1052 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6