Question: ChiPQC run time error
0
gravatar for NANADAWONG
2.0 years ago by
NANADAWONG0
NANADAWONG0 wrote:

Installed ChIPQC r package and I run ChiPQCsample encountered the following error

ChIPQCsample(testSample,peaks=NULL,annotation=NULL)
Bam file has 25 contigs
Error in validObject(.Object) :
invalid class “PhredQuality” object: undefined class for slot "elementMetadata" ("DataTableORNULL")

Please help! Thanks!

 

chipqc • 412 views
ADD COMMENTlink modified 2.0 years ago by Thomas Carroll400 • written 2.0 years ago by NANADAWONG0
Answer: ChiPQC run time error
0
gravatar for Thomas Carroll
2.0 years ago by
United States/New York/The Rockefeller University
Thomas Carroll400 wrote:

hi,

Could you provide the session information by running sessionInfo() function?  

> sessionInfo()

best,

tom

ADD COMMENTlink written 2.0 years ago by Thomas Carroll400

Hi,

 

Any success on this..??

ADD REPLYlink written 17 months ago by geekyvt0

I don't think there is anything to do. No session information or any details on file inputs.

 

ADD REPLYlink written 17 months ago by Thomas Carroll400
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