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                    olj23
        
    
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        @olj23-13714
        Last seen 7.6 years ago
        
    Possibly outdated result from listDatabases()
According to the KEGG API docs (which are linked in the function's documentation), the following databases are available:
pathway | brite | module | ko | genome | <org> | vg | ag | compound |
glycan | reaction | rclass | enzyme | disease | drug | dgroup | environ |
genes | ligand | kegg | <medicus> | <outside>
Indeed, calls can be made to any of these databases using keggFind, keggGet etc.
However, listDatabases() returns the following list instead:
 [1] "pathway"  "brite"    "module"   "disease"  "drug"     "environ"  "ko"       "genome"   "compound"
[10] "glycan"   "reaction" "rclass"   "enzyme"   "organism"
Note that:
vg,ag,dgroup,genes,ligandare available but not listedorganismis listed but not available
The function output may require updating.
