Showing: easyrnaseq • reset
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simpleRNASeq easyRNAseq warnings edgeR error
edger easyrnaseq simplernaseq deformats written 21 months ago by KGies • 0 • updated 20 months ago by Nicolas Delhomme • 320
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Warning: missing reverse strand option in easyRNASeq.
rnaseq easyrnaseq strand written 2.3 years ago by Michael Dondrup • 10 • updated 2.3 years ago by Hervé Pagès ♦♦ 14k
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729
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simpleRNASeq stopped running (related to S4 vectors?)
easyrnaseq s4vectors simplernaseq written 3.9 years ago by michael.dhar • 0 • updated 3.9 years ago by Nicolas Delhomme • 320
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933
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Package installation errors for Bioconductor and easyRNASeq
biocinstaller easyrnaseq installation written 3.9 years ago by michael.dhar • 0 • updated 3.9 years ago by Martin Morgan ♦♦ 23k
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672
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Error reading BAM file with duplicated header in easyRNAseq and GenomicAlignments
easyrnaseq genomicalignments software error bam written 4.1 years ago by Michael Dondrup • 10 • updated 4.0 years ago by Martin Morgan ♦♦ 23k
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4
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easyRNAseq annotation file
annotation easyrnaseq written 4.1 years ago by kylvalda • 0
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Issue with easyRNASeq
easyrnaseq error written 4.3 years ago by ea11g0 • 0
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5
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1.5k
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5
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Several issues with the package easyRNASeq
easyrnaseq bug written 4.3 years ago by Michael Dondrup • 10
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718
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simpleRNASeq error importing BAM files
easyrnaseq simplernaseq written 4.3 years ago by ea11g0 • 0 • updated 4.3 years ago by James W. MacDonald ♦ 51k
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easyRNASeq: "Error in IRangesList"
easyrnaseq written 4.4 years ago by surjray • 0
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2
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1.1k
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2
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count tables created with easyRNASeq and the rpkm() function from edgeR
edger easyrnaseq rpkm written 4.7 years ago by Sylvain Foisy • 30 • updated 4.7 years ago by Nicolas Delhomme • 320
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4
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4
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easyRNAseq says Your annotation is not in sync with your alignments!
easyrnaseq written 4.7 years ago by Mayte • 0 • updated 4.7 years ago by Nicolas Delhomme • 320
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easyRNASeq error: Error in aggregate.data.frame(as.data.frame(x), ...) : no rows to aggregate
easyrnaseq written 4.9 years ago by sylvian • 0
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Getting a count matrix from a SummerizedExpriment with EasyRNASeq
easyrnaseq written 5.0 years ago by Sylvain Foisy • 30
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678
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1
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Devel version of easyRNASeq: using the simpleRNASeq method gives an error
easyrnaseq written 5.6 years ago by Sylvain Foisy • 80 • updated 5.6 years ago by Nicolas Delhomme • 320
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702
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1
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Devel version of easyRNASeq: using the simpleRNASeq method gives an error
annotation easyrnaseq written 5.6 years ago by Nicolas Delhomme • 320 • updated 5.6 years ago by Sylvain Foisy • 80
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654
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easyRNASeq packages: overlapping exons warning unsolved (?) and use of paired end information
coverage annotation go cancer organism edger deseq genomicranges rsubread easyrnaseq written 5.9 years ago by Gordon Smyth ♦ 38k • updated 5.9 years ago by Nicolas Delhomme • 320
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Using a countDataSet as input data in DESeq2
easyrnaseq written 5.9 years ago by Guest User • 12k • updated 5.9 years ago by Michael Love ♦ 25k
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708
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0
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easyRNASeq packages: overlapping exons warning unsolved (?) and use of paired end information
coverage annotation go cancer organism edger deseq genomicranges easyrnaseq written 5.9 years ago by Nicolas Delhomme • 320
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2
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836
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2
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easyRNAseq and DEseq for no replicate RNAseq
rnaseq process easyrnaseq written 5.9 years ago by Isabelle Stévant • 10 • updated 5.9 years ago by Nicolas Delhomme • 320
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2
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944
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2
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Using easyRNASeq package: question about BAM/BAI and links to them
easyrnaseq written 5.9 years ago by Sylvain Foisy • 80 • updated 5.9 years ago by Sylvain Foisy • 30
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1.2k
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1
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GTF file error when using easyRNAseq�
annotation organism bsgenome deseq easyrnaseq written 5.9 years ago by Guest User • 12k • updated 5.9 years ago by delhomme@embl.de • 1.2k
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eayRNASeq with Ensemble GRCh37 help
annotation organism easyrnaseq deseq2 written 6.1 years ago by Aki Hoji • 10 • updated 6.1 years ago by delhomme@embl.de • 1.2k
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703
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EasyRNAseq - error in building count table - Error in unlist
sequencing rnaseq edger easyrnaseq written 6.1 years ago by Guest User • 12k • updated 6.1 years ago by delhomme@embl.de • 1.2k
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error in "count" for SummarizedExperiment in easyRNASeq
easyrnaseq deseq2 written 6.1 years ago by Lescai, Francesco • 380
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