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edgeR FC calculation question
updated 12.0 years ago by ★ 7.9k • written 12.0 years ago by ★ 1.3k
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2
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2.0k
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DESeq Fold-Change calculation
DESeq DESeq
updated 13.4 years ago by ★ 3.8k • written 13.4 years ago by ★ 1.3k
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2.0k
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Comment: C: DESeq Fold-Change calculation
13.4 years ago Lana Schaffer ★ 1.3k
0
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3
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1.3k
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DESeq variance stabilization
RNASeq RNASeq
updated 13.4 years ago by ★ 13k • written 13.4 years ago by ★ 1.3k
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1
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1.3k
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Comment: C: DESeq variance stabilization
13.4 years ago Lana Schaffer ★ 1.3k
0
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1
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2.1k
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edgeR for miRNA
edgeR edgeR
updated 14.2 years ago by ▴ 880 • written 14.2 years ago by ★ 1.3k
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1
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1.7k
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Comment: C: uneven counts for edgeR
14.3 years ago Lana Schaffer ★ 1.3k
0
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0
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1.1k
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RNA-Seq: lognormal, Neg Bin, Poisson distribution
14.3 years ago Lana Schaffer ★ 1.3k
0
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5
replies
1.7k
views
uneven counts for edgeR
edgeR edgeR
updated 14.3 years ago by 53k • written 14.3 years ago by ★ 1.3k
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1
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1.7k
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Comment: C: uneven counts for edgeR
14.3 years ago Lana Schaffer ★ 1.3k
0
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0
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1.3k
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PCR bias in RNA-Seq
14.3 years ago Lana Schaffer ★ 1.3k
0
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1
reply
1.6k
views
RNA-Seq : comparison cuffdiff, edgeR, Partek
edgeR edgeR
updated 14.3 years ago by ▴ 80 • written 14.3 years ago by ★ 1.3k
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2
replies
2.9k
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EdgeR- equal number of columns per group?
updated 14.7 years ago by ▴ 260 • written 14.7 years ago by ★ 1.3k
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0
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2.9k
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Comment: C: EdgeR- equal number of columns per group?
14.7 years ago Lana Schaffer ★ 1.3k
0
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2
replies
1.4k
views
raw counts for edgeR
Coverage Coverage
updated 14.7 years ago by 21k • written 14.7 years ago by ★ 1.3k
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1
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1.2k
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RNA-Seq/edgeR reproducability between lanes
Normalization Normalization
updated 14.7 years ago by ★ 1.1k • written 14.7 years ago by ★ 1.3k
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7
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2.4k
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calcNormFactors - normalization
Normalization Normalization
updated 14.7 years ago by ▴ 260 • written 14.7 years ago by ★ 1.3k
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0
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2.4k
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Comment: C: calcNormFactors - normalization
14.7 years ago Lana Schaffer ★ 1.3k
0
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0
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2.4k
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Comment: C: calcNormFactors - normalization
14.7 years ago Lana Schaffer ★ 1.3k
0
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1
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2.4k
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Comment: C: calcNormFactors - normalization
14.7 years ago Lana Schaffer ★ 1.3k
0
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4
replies
1.8k
views
FC calculation in Limma
updated 15.0 years ago by ★ 6.5k • written 15.0 years ago by ★ 1.3k
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1
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1.8k
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Comment: C: FC calculation in Limma
15.0 years ago Lana Schaffer ★ 1.3k
1
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7
replies
2.1k
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Limma -time course - no replicates
limma limma
updated 15.6 years ago by ★ 6.0k • written 15.7 years ago by ★ 1.3k
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1
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2.1k
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Comment: C: Limma -time course - no replicates
15.6 years ago Lana Schaffer ★ 1.3k
1
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1
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2.1k
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Comment: C: Limma -time course - no replicates
15.7 years ago Lana Schaffer ★ 1.3k
0
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0
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2.0k
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Comment: C: Affy miRNA
16.3 years ago Lana Schaffer ★ 1.3k
0
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1
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2.0k
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Comment: C: Affy miRNA
16.3 years ago Lana Schaffer ★ 1.3k
0
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7
replies
2.0k
views
Affy miRNA
miRNA affy miRNA affy
updated 16.3 years ago by ▴ 580 • written 16.3 years ago by ★ 1.3k
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3
replies
1.5k
views
Simpleaffy QC
affy affy
updated 16.6 years ago by ▴ 400 • written 16.6 years ago by ★ 1.3k
0
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1
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1.5k
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Comment: C: Simpleaffy QC
16.6 years ago Lana Schaffer ★ 1.3k
0
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1
reply
1.0k
views
filtered Exon Arrays: Core vs Extended Dataset
limma limma
updated 16.7 years ago by ★ 1.1k • written 16.7 years ago by ★ 1.3k
0
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1
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853
views
shortReads
updated 16.9 years ago by 25k • written 16.9 years ago by ★ 1.3k
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1
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2.2k
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Comment: C: memory exhausted for readAligned
17.0 years ago Lana Schaffer ★ 1.3k
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0
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2.2k
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Comment: C: memory exhausted for readAligned
17.0 years ago Lana Schaffer ★ 1.3k
0
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8
replies
2.2k
views
memory exhausted for readAligned
Alignment Alignment
updated 17.0 years ago by 25k • written 17.0 years ago by ★ 1.3k
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1
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2.2k
views
Comment: C: memory exhausted for readAligned
17.0 years ago Lana Schaffer ★ 1.3k
0
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0
replies
827
views
Tinn-R
17.0 years ago Lana Schaffer ★ 1.3k
0
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0
replies
873
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Illumina Chip-Seq software
17.0 years ago Lana Schaffer ★ 1.3k
0
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5
replies
1.8k
views
installing xps
xps xps
updated 17.1 years ago by ★ 3.9k • written 17.1 years ago by ★ 1.3k
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1
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1.8k
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Comment: C: installing xps
17.1 years ago Lana Schaffer ★ 1.3k
0
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1
reply
1.8k
views
Comment: C: installing xps
17.1 years ago Lana Schaffer ★ 1.3k
0
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0
replies
798
views
Illumina Detection Pvalues
17.3 years ago Lana Schaffer ★ 1.3k
0
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0
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789
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Category for Illumina transcripts
Category Category
17.4 years ago Lana Schaffer ★ 1.3k
0
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4
replies
1.4k
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filtering Illumina data
updated 17.4 years ago by ★ 3.6k • written 17.4 years ago by ★ 1.3k
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0
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1.4k
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Comment: C: filtering Illumina data
17.4 years ago Lana Schaffer ★ 1.3k
0
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0
replies
880
views
combining samples before normalization
Normalization moe430a probe Normalization moe430a probe
17.6 years ago Lana Schaffer ★ 1.3k
0
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1
reply
1.8k
views
Answer: A: the function subset inside a function
17.6 years ago Lana Schaffer ★ 1.3k
0
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2
replies
1.8k
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the function subset inside a function
17.6 years ago Lana Schaffer ★ 1.3k
0
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0
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1.1k
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Comment: C: error retrieving normalized probe values from "pm" array
17.6 years ago Lana Schaffer ★ 1.3k
0
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3
replies
1.1k
views
error retrieving normalized probe values from "pm" array
probe probe
17.6 years ago Lana Schaffer ★ 1.3k
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