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edgeR FC calculation question
updated 10.3 years ago by ★ 7.9k • written 10.3 years ago by ★ 1.3k
0
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2
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1.7k
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DESeq Fold-Change calculation
DESeq DESeq
updated 11.7 years ago by ★ 3.7k • written 11.7 years ago by ★ 1.3k
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1.7k
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Comment: C: DESeq Fold-Change calculation
11.7 years ago Lana Schaffer ★ 1.3k
0
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3
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940
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DESeq variance stabilization
RNASeq RNASeq
updated 11.7 years ago by ★ 13k • written 11.7 years ago by ★ 1.3k
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1
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940
views
Comment: C: DESeq variance stabilization
11.7 years ago Lana Schaffer ★ 1.3k
0
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1
reply
1.8k
views
edgeR for miRNA
edgeR edgeR
updated 12.5 years ago by ▴ 880 • written 12.5 years ago by ★ 1.3k
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1
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1.3k
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Comment: C: uneven counts for edgeR
12.5 years ago Lana Schaffer ★ 1.3k
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0
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838
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RNA-Seq: lognormal, Neg Bin, Poisson distribution
12.5 years ago Lana Schaffer ★ 1.3k
0
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5
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1.3k
views
uneven counts for edgeR
edgeR edgeR
updated 12.5 years ago by 50k • written 12.5 years ago by ★ 1.3k
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1
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1.3k
views
Comment: C: uneven counts for edgeR
12.5 years ago Lana Schaffer ★ 1.3k
0
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0
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1.1k
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PCR bias in RNA-Seq
12.5 years ago Lana Schaffer ★ 1.3k
0
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1
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1.3k
views
RNA-Seq : comparison cuffdiff, edgeR, Partek
edgeR edgeR
updated 12.6 years ago by ▴ 80 • written 12.6 years ago by ★ 1.3k
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2
replies
2.5k
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EdgeR- equal number of columns per group?
updated 12.9 years ago by ▴ 260 • written 12.9 years ago by ★ 1.3k
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0
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2.5k
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Comment: C: EdgeR- equal number of columns per group?
12.9 years ago Lana Schaffer ★ 1.3k
0
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2
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1.1k
views
raw counts for edgeR
Coverage Coverage
updated 13.0 years ago by 21k • written 13.0 years ago by ★ 1.3k
0
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1
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904
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RNA-Seq/edgeR reproducability between lanes
Normalization Normalization
updated 13.0 years ago by ★ 1.1k • written 13.0 years ago by ★ 1.3k
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7
replies
1.8k
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calcNormFactors - normalization
Normalization Normalization
updated 13.0 years ago by ▴ 260 • written 13.0 years ago by ★ 1.3k
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0
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1.8k
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Comment: C: calcNormFactors - normalization
13.0 years ago Lana Schaffer ★ 1.3k
0
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0
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1.8k
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Comment: C: calcNormFactors - normalization
13.0 years ago Lana Schaffer ★ 1.3k
0
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1
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1.8k
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Comment: C: calcNormFactors - normalization
13.0 years ago Lana Schaffer ★ 1.3k
0
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4
replies
1.4k
views
FC calculation in Limma
updated 13.3 years ago by ★ 6.5k • written 13.3 years ago by ★ 1.3k
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1
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1.4k
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Comment: C: FC calculation in Limma
13.3 years ago Lana Schaffer ★ 1.3k
1
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7
replies
1.5k
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Limma -time course - no replicates
limma limma
updated 13.9 years ago by ★ 6.0k • written 13.9 years ago by ★ 1.3k
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1
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1.5k
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Comment: C: Limma -time course - no replicates
13.9 years ago Lana Schaffer ★ 1.3k
1
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1
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1.5k
views
Comment: C: Limma -time course - no replicates
13.9 years ago Lana Schaffer ★ 1.3k
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0
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1.4k
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Comment: C: Affy miRNA
14.5 years ago Lana Schaffer ★ 1.3k
0
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1
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1.4k
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Comment: C: Affy miRNA
14.5 years ago Lana Schaffer ★ 1.3k
0
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7
replies
1.4k
views
Affy miRNA
miRNA affy miRNA affy
updated 14.5 years ago by ▴ 580 • written 14.6 years ago by ★ 1.3k
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3
replies
1.1k
views
Simpleaffy QC
affy affy
updated 14.9 years ago by ▴ 400 • written 14.9 years ago by ★ 1.3k
0
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1
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1.1k
views
Comment: C: Simpleaffy QC
14.9 years ago Lana Schaffer ★ 1.3k
0
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1
reply
708
views
filtered Exon Arrays: Core vs Extended Dataset
limma limma
updated 15.0 years ago by ★ 1.1k • written 15.0 years ago by ★ 1.3k
0
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1
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675
views
shortReads
updated 15.2 years ago by 25k • written 15.2 years ago by ★ 1.3k
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1
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1.5k
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Comment: C: memory exhausted for readAligned
15.2 years ago Lana Schaffer ★ 1.3k
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0
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1.5k
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Comment: C: memory exhausted for readAligned
15.2 years ago Lana Schaffer ★ 1.3k
0
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8
replies
1.5k
views
memory exhausted for readAligned
Alignment Alignment
updated 15.2 years ago by 25k • written 15.2 years ago by ★ 1.3k
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1
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1.5k
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Comment: C: memory exhausted for readAligned
15.2 years ago Lana Schaffer ★ 1.3k
0
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0
replies
600
views
Tinn-R
15.2 years ago Lana Schaffer ★ 1.3k
0
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0
replies
673
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Illumina Chip-Seq software
15.3 years ago Lana Schaffer ★ 1.3k
0
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5
replies
1.2k
views
installing xps
xps xps
updated 15.4 years ago by ★ 3.9k • written 15.4 years ago by ★ 1.3k
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1
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1.2k
views
Comment: C: installing xps
15.4 years ago Lana Schaffer ★ 1.3k
0
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1
reply
1.2k
views
Comment: C: installing xps
15.4 years ago Lana Schaffer ★ 1.3k
0
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0
replies
627
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Illumina Detection Pvalues
15.6 years ago Lana Schaffer ★ 1.3k
0
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0
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600
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Category for Illumina transcripts
Category Category
15.6 years ago Lana Schaffer ★ 1.3k
0
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4
replies
1.0k
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filtering Illumina data
updated 15.7 years ago by ★ 3.6k • written 15.7 years ago by ★ 1.3k
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0
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1.0k
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Comment: C: filtering Illumina data
15.7 years ago Lana Schaffer ★ 1.3k
0
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0
replies
660
views
combining samples before normalization
Normalization moe430a probe Normalization moe430a probe
15.8 years ago Lana Schaffer ★ 1.3k
0
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2
replies
1.4k
views
the function subset inside a function
15.8 years ago Lana Schaffer ★ 1.3k
0
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1
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1.4k
views
Answer: A: the function subset inside a function
15.8 years ago Lana Schaffer ★ 1.3k
0
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0
replies
856
views
Comment: C: error retrieving normalized probe values from "pm" array
15.8 years ago Lana Schaffer ★ 1.3k
0
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3
replies
856
views
error retrieving normalized probe values from "pm" array
probe probe
15.8 years ago Lana Schaffer ★ 1.3k
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