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Comment: C: RPKM normalization for several samples using a for loop
updated 3.1 years ago by 50k • written 7.7 years ago by • 0
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1.9k
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Comment: C: RPKM normalization for several samples using a for loop
7.7 years ago humberto_munoz • 0
0
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1
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1.9k
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Comment: C: RPKM normalization for several samples using a for loop
7.7 years ago humberto_munoz • 0
0
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1
reply
1.9k
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Comment: C: RPKM normalization for several samples using a for loop
updated 3.1 years ago by 50k • written 7.7 years ago by • 0
0
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0
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1.5k
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Comment: C: Using the RPKM function for several samples simultaneously
7.7 years ago humberto_munoz • 0
0
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0
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921
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Comment: A: Defining the design matrix
updated 7.7 years ago by 50k • written 7.8 years ago by • 0
1
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9
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1.9k
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RPKM normalization for several samples using a for loop
edger forloop
updated 3.1 years ago by 50k • written 7.7 years ago by • 0
0
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1
reply
1.5k
views
Comment: C: Using the RPKM function for several samples simultaneously
7.8 years ago humberto_munoz • 0
0
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4
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1.5k
views
Using the RPKM function for several samples simultaneously
normalization
updated 3.1 years ago by 50k • written 7.8 years ago by • 0
0
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0
replies
1.0k
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Plotting False discoveries vs genes selected
plot
7.8 years ago humberto_munoz • 0
1
vote
3
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921
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Defining the design matrix
design matrix
7.8 years ago humberto_munoz • 0
0
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0
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921
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Comment: C: Defining the design matrix
7.8 years ago humberto_munoz • 0
0
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0
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1.1k
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Comment: C: Dropping genes with zero read counts in a dataset before TMM Normalization
7.8 years ago humberto_munoz • 0
2
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3
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1.1k
views
Dropping genes with zero read counts in a dataset before TMM Normalization
normalization
7.8 years ago humberto_munoz • 0
0
votes
1
reply
984
views
Comment: C: Filtering very low genes counts across all libraries
7.8 years ago humberto_munoz • 0
0
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6
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984
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Filtering very low genes counts across all libraries
gene filtering
7.8 years ago humberto_munoz • 0
0
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1
reply
984
views
Answer: A: Filtering very low genes counts across all libraries
7.8 years ago humberto_munoz • 0
0
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0
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984
views
Answer: A: Filtering very low genes counts across all libraries
7.8 years ago humberto_munoz • 0
0
votes
1
reply
709
views
Clearing predefined values in variables
variables
7.8 years ago humberto_munoz • 0
0
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0
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2.4k
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Answer: A: Getting rawdata for TMM normalization
7.8 years ago humberto_munoz • 0
0
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10
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2.4k
views
Getting rawdata for TMM normalization
normalization
7.8 years ago humberto_munoz • 0
0
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0
replies
2.4k
views
Answer: A: Getting rawdata for TMM normalization
7.8 years ago humberto_munoz • 0
0
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0
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2.4k
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Answer: A: Getting rawdata for TMM normalization
7.8 years ago humberto_munoz • 0
0
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1
reply
2.4k
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Answer: A: Getting rawdata for TMM normalization
7.8 years ago humberto_munoz • 0
0
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0
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969
views
Comment: C: Normalizing RNA-Seq data without replicates.
7.9 years ago humberto_munoz • 0
0
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3
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969
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Normalizing RNA-Seq data without replicates.
normalization
updated 7.9 years ago by ▴ 420 • written 7.9 years ago by • 0
2
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8
replies
3.0k
views
Problem using the readDGE function
readDGE edgeR
updated 7.9 years ago by 50k • written 7.9 years ago by • 0
0
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1
reply
3.0k
views
Comment: C: Problem using the readDGE function
7.9 years ago humberto_munoz • 0
0
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1
reply
3.0k
views
Comment: A: Problem using the readDGE function
updated 7.9 years ago by 50k • written 7.9 years ago by • 0
0
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0
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3.0k
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Comment: C: Problem using the readDGE function
7.9 years ago humberto_munoz • 0
0
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0
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1.3k
views
Comment: A: Sample sizes must be equal for TMM?
7.9 years ago humberto_munoz • 0
2
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2
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1.3k
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Sample sizes must be equal for TMM?
TMM edgeR
7.9 years ago humberto_munoz • 0
1
vote
3
replies
2.1k
views
Error Estimating the NB Dispersion of a Dataset
dispersion edgeR
updated 7.9 years ago by 50k • written 7.9 years ago by • 0
0
votes
1
reply
2.1k
views
Answer: A: Error Estimating the NB Dispersion of a Dataset
7.9 years ago humberto_munoz • 0
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