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217
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Comment:
Comment: Using DESeq2 for age prediction
17 days ago
ATpoint
★ 5.0k
0
votes
1
reply
217
views
Answer:
Answer: Using DESeq2 for age prediction
18 days ago
ATpoint
★ 5.0k
1
vote
0
replies
387
views
Comment:
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?
5 weeks ago
ATpoint
★ 5.0k
0
votes
1
reply
386
views
Answer:
Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes
5 weeks ago
ATpoint
★ 5.0k
1
vote
1
reply
311
views
Answer:
Answer: Error Loading Experiment from SimBenchData Package
6 weeks ago
ATpoint
★ 5.0k
0
votes
0
replies
259
views
Comment:
Comment: replace cat with message in glmTreat when lfc = 0
8 weeks ago
ATpoint
★ 5.0k
0
votes
0
replies
389
views
Answer:
Answer: readDNAStringSet with non DNA characters
8 weeks ago
ATpoint
★ 5.0k
1
vote
0
replies
1.1k
views
Comment:
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
11 weeks ago
ATpoint
★ 5.0k
0
votes
1
reply
13k
views
Comment:
Comment: Can NanoString data be analyzed using DESeq2?
11 weeks ago
ATpoint
★ 5.0k
0
votes
2
replies
1.1k
views
Comment:
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
12 weeks ago
ATpoint
★ 5.0k
0
votes
1
reply
1.1k
views
Comment:
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
12 weeks ago
ATpoint
★ 5.0k
0
votes
1
reply
695
views
Comment:
Comment: Are voomByGroup and voomLmFit compatible?
12 weeks ago
ATpoint
★ 5.0k
0
votes
1
reply
1.1k
views
Comment:
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
12 weeks ago
ATpoint
★ 5.0k
0
votes
0
replies
393
views
Comment:
Comment: Differential expression on the transcript-level
3 months ago
ATpoint
★ 5.0k
1
vote
2
replies
5.6k
views
Comment:
Comment: competitive enrichment test yields too few significant results, self-contained t
4 months ago
ATpoint
★ 5.0k
1
vote
1
reply
1.9k
views
Comment:
Comment: Should Xenium pseudobulk experiments be analysed like microarrays (limma) or lik
4 months ago
ATpoint
★ 5.0k
1
vote
1
reply
1.9k
views
Comment:
Comment: Should Xenium pseudobulk experiments be analysed like microarrays (limma) or lik
4 months ago
ATpoint
★ 5.0k
1
vote
1
reply
1.9k
views
Comment:
Comment: Should Xenium pseudobulk experiments be analysed like microarrays (limma) or lik
4 months ago
ATpoint
★ 5.0k
1
vote
1
reply
5.6k
views
Comment:
Comment: competitive enrichment test yields too few significant results, self-contained t
4 months ago
ATpoint
★ 5.0k
0
votes
0
replies
2.3k
views
Answer:
Answer: Regarding the issue of background genes in enrichment analysis
4 months ago
ATpoint
★ 5.0k
0
votes
1
reply
960
views
Answer:
Answer: gene detection across experiments
4 months ago
ATpoint
★ 5.0k
0
votes
0
replies
1.0k
views
Answer:
Answer: Starting with a clean bioconductor rstudio container
4 months ago
ATpoint
★ 5.0k
0
votes
0
replies
541
views
Answer:
Answer: Problem in Chip-seq data analysis using MACS3
4 months ago
ATpoint
★ 5.0k
1
vote
0
replies
2.6k
views
Answer:
Answer: Deseq2 paired sample in the design is considered as "batch"?
5 months ago
ATpoint
★ 5.0k
1
vote
0
replies
1.4k
views
Answer:
Answer: Biological replicates consideration in DESeq2 design formula.
5 months ago
ATpoint
★ 5.0k
1
vote
1
reply
2.2k
views
Answer:
Answer: Heatmap of the Count Matrix
5 months ago
ATpoint
★ 5.0k
0
votes
0
replies
563
views
Answer:
Answer: DESeq2 results
5 months ago
ATpoint
★ 5.0k
0
votes
0
replies
5.7k
views
Comment:
Comment: How to load scRNA-seq data from GEO
5 months ago
ATpoint
★ 5.0k
0
votes
1
reply
1.5k
views
Comment:
Comment: ERCC Spike-In controls being discarded during Tximeta process:
5 months ago
ATpoint
★ 5.0k
0
votes
1
reply
1.5k
views
Comment:
Comment: ERCC Spike-In controls being discarded during Tximeta process:
5 months ago
ATpoint
★ 5.0k
0
votes
0
replies
1.1k
views
Comment:
Comment: Memory issue while using "quickcluster" and "computeSumFactors" functions on sin
5 months ago
ATpoint
★ 5.0k
0
votes
0
replies
449
views
Answer:
Answer: Best tximport quant.genes.sf
6 months ago
ATpoint
★ 5.0k
0
votes
2
replies
5.7k
views
Comment:
Comment: How to load scRNA-seq data from GEO
6 months ago
ATpoint
★ 5.0k
0
votes
2
replies
5.7k
views
Comment:
Comment: How to load scRNA-seq data from GEO
6 months ago
ATpoint
★ 5.0k
0
votes
2
replies
5.7k
views
Comment:
Comment: How to load scRNA-seq data from GEO
6 months ago
ATpoint
★ 5.0k
0
votes
1
reply
637
views
Comment:
Comment: FlowSOM is unable to create Output
6 months ago
ATpoint
★ 5.0k
0
votes
1
reply
1.8k
views
Comment:
Comment: Discrepancies in normalised count data vs unnormalised
6 months ago
ATpoint
★ 5.0k
0
votes
1
reply
678
views
Answer:
Answer: Design formula for circadian time-course data for vst() function
6 months ago
ATpoint
★ 5.0k
0
votes
0
replies
17k
views
Comment:
Comment: GSEA preranked analysis downstream of DEseq2
6 months ago
ATpoint
★ 5.0k
1
vote
0
replies
3.3k
views
Comment:
Comment: Check removeBatchEffect effectiveness
6 months ago
ATpoint
★ 5.0k
1
vote
2
replies
2.6k
views
Answer:
Answer: edgeR::cpm() results in negative values from raw counts of 0
6 months ago
ATpoint
★ 5.0k
0
votes
0
replies
1.0k
views
Answer:
Answer: Log2foldchange strange behavior
7 months ago
ATpoint
★ 5.0k
0
votes
1
reply
1.0k
views
Comment:
Comment: Log2foldchange strange behavior
7 months ago
ATpoint
★ 5.0k
0
votes
0
replies
887
views
Answer:
Answer: WGCNA
7 months ago
ATpoint
★ 5.0k
1
vote
0
replies
1.3k
views
Comment:
Comment: Differential expression analysis using two TCGA datasets
7 months ago
ATpoint
★ 5.0k
1
vote
0
replies
1.3k
views
Answer:
Answer: PhD scholar
7 months ago
ATpoint
★ 5.0k
0
votes
1
reply
2.7k
views
Comment:
Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
7 months ago
ATpoint
★ 5.0k
1
vote
0
replies
1.7k
views
Answer:
Answer: Origin of the labels for the SingleCellMultiModal dataset
7 months ago
ATpoint
★ 5.0k
0
votes
2
replies
2.7k
views
Comment:
Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
7 months ago
ATpoint
★ 5.0k
0
votes
1
reply
2.3k
views
Comment:
Comment: DiffBind can't find a DAR
7 months ago
ATpoint
★ 5.0k
1,096 results • Page
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