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Comment: Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
2 days ago ATpoint ★ 4.1k
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241
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Comment: Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
2 days ago ATpoint ★ 4.1k
1
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1
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241
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Comment: Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
2 days ago ATpoint ★ 4.1k
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95
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Comment: Comment: Problem installing ChAMP on a MacBook
2 days ago ATpoint ★ 4.1k
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117
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Comment: Comment: How to correctly adjust for gender in edgeR
3 days ago ATpoint ★ 4.1k
1
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241
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Comment: Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
3 days ago ATpoint ★ 4.1k
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375
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Comment: Comment: deseq2 results
10 days ago ATpoint ★ 4.1k
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447
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Comment: Comment: Extremely small p-values using Limma for proteomic data
10 days ago ATpoint ★ 4.1k
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304
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Comment: Comment: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
10 days ago ATpoint ★ 4.1k
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447
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Comment: Comment: Extremely small p-values using Limma for proteomic data
10 days ago ATpoint ★ 4.1k
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222
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Comment: Comment: Couldn't connect to server while using "pathways"
12 days ago ATpoint ★ 4.1k
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254
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Comment: Comment: Too many significant genes when integrating gtex and tcga
13 days ago ATpoint ★ 4.1k
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222
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Comment: Comment: Differences in differential analysis methods for RNA-Seq
16 days ago ATpoint ★ 4.1k
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222
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Comment: Comment: Differences in differential analysis methods for RNA-Seq
16 days ago ATpoint ★ 4.1k
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269
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Comment: Comment: DESeq2: Contrast for two conditions combined versus one condition (A+B_vs_C)
19 days ago ATpoint ★ 4.1k
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253
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Comment: Comment: Deseq2. decontXcounts not integers. Useful alternative?
22 days ago ATpoint ★ 4.1k
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175
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Comment: Comment: Reproducibility issue with scran together with lapply and BiocParallel
23 days ago ATpoint ★ 4.1k
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265
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Comment: Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge
24 days ago ATpoint ★ 4.1k
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385
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Comment: Comment: DESeq2 output used for PCA plot on R studio
24 days ago ATpoint ★ 4.1k
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265
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Comment: Comment: Differential peaks that were not identified in diffbind were identified in diseq
29 days ago ATpoint ★ 4.1k
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265
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Comment: Comment: Differential peaks that were not identified in diffbind were identified in diseq
4 weeks ago ATpoint ★ 4.1k
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112
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Comment: Comment: Input Question for deseq.r
4 weeks ago ATpoint ★ 4.1k
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145
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Comment: Comment: Deseq2 Rlog transformation
4 weeks ago ATpoint ★ 4.1k
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284
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Comment: Comment: A ComBat-seq issue: the covariates are confounded
4 weeks ago ATpoint ★ 4.1k
1
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457
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Comment: Comment: Not fully paired differential gene expression analysis
5 weeks ago ATpoint ★ 4.1k
1
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191
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Comment: Comment: [DiffBind] Obtaining normalization factors
5 weeks ago ATpoint ★ 4.1k
1
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1
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306
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Comment: Comment: Surrogate variable analysis for paired RNA seq experiment
5 weeks ago ATpoint ★ 4.1k
1
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1
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306
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Comment: Comment: Surrogate variable analysis for paired RNA seq experiment
5 weeks ago ATpoint ★ 4.1k
1
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1
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306
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Comment: Comment: Surrogate variable analysis for paired RNA seq experiment
5 weeks ago ATpoint ★ 4.1k
1
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0
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457
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Comment: Comment: Not fully paired differential gene expression analysis
5 weeks ago ATpoint ★ 4.1k
0
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219
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Comment: Comment: Bluster and Varieties of Louvain Clulstering
6 weeks ago ATpoint ★ 4.1k
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375
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Comment: Comment: PCA of different bacterial species
7 weeks ago ATpoint ★ 4.1k
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313
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Comment: Comment: EDAseq to normalise for both gene-length and GC-content
8 weeks ago ATpoint ★ 4.1k
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313
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Comment: Comment: EDAseq to normalise for both gene-length and GC-content
8 weeks ago ATpoint ★ 4.1k
1
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306
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Comment: Comment: Extracting genomic sequences using agat and bedtools yields different results
8 weeks ago ATpoint ★ 4.1k
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285
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Comment: Comment: Help with Complex DESeq2 Design
8 weeks ago ATpoint ★ 4.1k
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213
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Comment: Comment: Visium RNA
8 weeks ago ATpoint ★ 4.1k
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2.2k
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Comment: Comment: Fail BiocManager::install(version='3.12')
8 weeks ago ATpoint ★ 4.1k
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347
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Comment: Comment: Missing Band on Volcano Plot from DESeq2
9 weeks ago ATpoint ★ 4.1k
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1
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272
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Comment: Comment: Scores used for DiffBind's dba.plotHeatmap
9 weeks ago ATpoint ★ 4.1k
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256
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Comment: Comment: Rcpp compilation error
10 weeks ago ATpoint ★ 4.1k
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455
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Comment: Comment: DESeq and SVA for batch effect
10 weeks ago ATpoint ★ 4.1k
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1
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382
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Comment: Comment: Factor vs Character in design
10 weeks ago ATpoint ★ 4.1k
1
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373
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Comment: Comment: Further clarification of unbalanced group sizes DESeq2
11 weeks ago ATpoint ★ 4.1k
0
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265
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Comment: Comment: How to select cells that represents more accurately a cluster in a scRNA-seq dat
11 weeks ago ATpoint ★ 4.1k
0
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1
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341
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Comment: Comment: problem in installing the new version of bioconductor
12 weeks ago ATpoint ★ 4.1k
0
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396
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Comment: Comment: vst transformation and zero counts
12 weeks ago ATpoint ★ 4.1k
1
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587
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Comment: Comment: Average biological replicates in RNA-seq
12 weeks ago ATpoint ★ 4.1k
0
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1
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587
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Comment: Comment: Average biological replicates in RNA-seq
12 weeks ago ATpoint ★ 4.1k
1
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1
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641
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Comment: Comment: How do you post on this forum?
3 months ago ATpoint ★ 4.1k
501 results • Page 1 of 11
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