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Comment: Comment: DESeq with multiple condition
4 months ago ATpoint ★ 4.1k
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682
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Comment: Comment: Should I use the 'log2FoldChange' from lfcShrink() to subset significant DEGs?
4 months ago ATpoint ★ 4.1k
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802
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Comment: Comment: scRNA-seq as pseudobulk for DEseq2: does AggregateExpression() normalize counts?
4 months ago ATpoint ★ 4.1k
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515
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Comment: Comment: Different genes expression with limma
4 months ago ATpoint ★ 4.1k
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1
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327
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Comment: Comment: Inconsistent results in DiffBind
4 months ago ATpoint ★ 4.1k
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301
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Comment: Comment: Can't download Bioconductor
4 months ago ATpoint ★ 4.1k
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2
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911
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Comment: Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance
4 months ago ATpoint ★ 4.1k
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911
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Comment: Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance
4 months ago ATpoint ★ 4.1k
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1
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1.7k
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Comment: Comment: JoinLayers function for Seurat Object for annotation with SingleR
4 months ago ATpoint ★ 4.1k
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529
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Comment: Comment: DESeq2 : stat or lfcshrink for GSEA analysis
4 months ago ATpoint ★ 4.1k
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354
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Comment: Comment: DiffBind getting Fold values of near 0
5 months ago ATpoint ★ 4.1k
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1
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630
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Comment: Comment: Deleted:No significant MVPs with a BH adjusted P-value below 0.05
5 months ago ATpoint ★ 4.1k
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371
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Comment: Comment: bam or VCF files from GSE75010
5 months ago ATpoint ★ 4.1k
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1
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909
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Comment: Comment: DropletUtils read10xcounts adds the 12 Cell Multiplexing Oligo tags as gene name
5 months ago ATpoint ★ 4.1k
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352
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Comment: Comment: Fail to annotate chromosome data to single cell sequencing data obtained from ce
5 months ago ATpoint ★ 4.1k
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2.1k
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Comment: Comment: Error when Installing BioConductor Package ('affy')
5 months ago ATpoint ★ 4.1k
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774
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Comment: Comment: trying to add SingleR label to Seurat Object fails
5 months ago ATpoint ★ 4.1k
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6.6k
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Comment: Comment: scater runUMAP fails with error "function 'as_cholmod_sparse' not provided by pa
5 months ago ATpoint ★ 4.1k
2
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866
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Comment: Comment: weird volcano plot
5 months ago ATpoint ★ 4.1k
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698
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Comment: Comment: DESeq2 unable to handle large count values
5 months ago ATpoint ★ 4.1k
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1
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551
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Comment: Comment: rnaSeqGene workflow not available in Bioconductor 3.18
5 months ago ATpoint ★ 4.1k
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0
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507
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Comment: Comment: DESeq2: FPMs varying based on sample groups used
6 months ago ATpoint ★ 4.1k
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1
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1.6k
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Comment: Comment: Graphics API Version Mismatch Error with DESeq2 and ggplot2 in RStudio on Ubuntu
6 months ago ATpoint ★ 4.1k
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1
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821
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Comment: Comment: Quickly calculating adjusted Fold Change with DESeq2
6 months ago ATpoint ★ 4.1k
1
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3
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1.1k
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Comment: Comment: Accounting for Batch effect reduces DEGs drastically
6 months ago ATpoint ★ 4.1k
0
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2
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658
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Comment: Comment: Mfuzz package loading issues
6 months ago ATpoint ★ 4.1k
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1
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1.1k
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Comment: Comment: Accounting for Batch effect reduces DEGs drastically
6 months ago ATpoint ★ 4.1k
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1
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473
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Comment: Comment: can't update bioconductor 3.18
6 months ago ATpoint ★ 4.1k
1
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0
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948
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Comment: Comment: [Bug] Segfault in edgeR::cpm
6 months ago ATpoint ★ 4.1k
0
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0
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515
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Comment: Comment: Duplicated expression values?
6 months ago ATpoint ★ 4.1k
0
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0
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461
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Comment: Comment: edgeR: Time course RNA-seq experiments
6 months ago ATpoint ★ 4.1k
1
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704
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Comment: Comment: limma: More differentially expressed genes when factor included in model than wh
6 months ago ATpoint ★ 4.1k
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372
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Comment: Comment: Extract LRT results for each comparison
7 months ago ATpoint ★ 4.1k
0
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1
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344
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Comment: Comment: Singlecell protein surface (ADT) pseudotime techniques
7 months ago ATpoint ★ 4.1k
0
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647
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Comment: Comment: For R version 4.0.2 and Biconductor version 3.11, clusterProfiler is not working
7 months ago ATpoint ★ 4.1k
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2
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652
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Comment: Comment: DataFrame Construction With Non-standard Column
7 months ago ATpoint ★ 4.1k
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1
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652
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Comment: Comment: DataFrame Construction With Non-standard Column
7 months ago ATpoint ★ 4.1k
0
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381
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Comment: Comment: TxDb.Dmelanogaster.UCSC.dm3.ensGene
7 months ago ATpoint ★ 4.1k
0
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0
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457
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Comment: Comment: how to adjust other conditions when calling DEGs by DESeq2
7 months ago ATpoint ★ 4.1k
1
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0
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854
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Comment: Comment: Getting batch corrected counts after RUVSeq
7 months ago ATpoint ★ 4.1k
1
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0
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545
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Comment: Comment: EdgeR and DESeq2, variance estimation and parametric test
7 months ago ATpoint ★ 4.1k
1
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1
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854
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Comment: Comment: Getting batch corrected counts after RUVSeq
7 months ago ATpoint ★ 4.1k
0
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1
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533
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Comment: Comment: AAbin vs DNAbin structures
8 months ago ATpoint ★ 4.1k
0
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0
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1.1k
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Comment: Comment: Is logNormCounts log2 normalised counts as default?
8 months ago ATpoint ★ 4.1k
1
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0
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1.5k
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Comment: Comment: PCA percent variance DESeq2
8 months ago ATpoint ★ 4.1k
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0
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2.9k
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Comment: Comment: Protein differential Expression analysis
8 months ago ATpoint ★ 4.1k
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1
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1.5k
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Comment: Comment: PCA percent variance DESeq2
8 months ago ATpoint ★ 4.1k
0
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0
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916
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Comment: Comment: Time-series RNA-seq analysis using DESeq2
8 months ago ATpoint ★ 4.1k
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1
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916
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Comment: Comment: Time-series RNA-seq analysis using DESeq2
8 months ago ATpoint ★ 4.1k
0
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1
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1.3k
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Comment: Comment: DittoDimPlot errror: Cannot find 'NA' in this Seurat object
8 months ago ATpoint ★ 4.1k
489 results • Page 2 of 10
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