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Comment: C: Comparison between two different group's pathway analysis results
6.2 years ago swbarnes2 ★ 1.4k
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1
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Comment: C: Two controls in RNAseq formula for DESeq2
6.3 years ago swbarnes2 ★ 1.4k
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1
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2.9k
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Comment: C: Two controls in RNAseq formula for DESeq2
6.3 years ago swbarnes2 ★ 1.4k
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1
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2.9k
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Answer: A: Two controls in RNAseq formula for DESeq2
6.3 years ago swbarnes2 ★ 1.4k
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1.0k
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Comment: C: understanding DEseq2 interactions before/after releveling the baseline
6.3 years ago swbarnes2 ★ 1.4k
1
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1.1k
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Answer: A: deseq2 formula design
6.3 years ago swbarnes2 ★ 1.4k
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1
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1.5k
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Comment: C: Questions for ResultsNames() and the Contrast function
6.3 years ago swbarnes2 ★ 1.4k
2
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1
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4.1k
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Answer: A: Importance of Order in Design Formula
6.3 years ago swbarnes2 ★ 1.4k
0
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1
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3.5k
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Answer: A: deseq2 correction batch effect without design
6.3 years ago swbarnes2 ★ 1.4k
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0
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810
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Answer: A: DESeq2 "Not full rank" Error
6.3 years ago swbarnes2 ★ 1.4k
0
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1
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2.6k
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Answer: C: RNA-seq time course analysis with only one experimental condition
6.3 years ago swbarnes2 ★ 1.4k
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1
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2.6k
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Answer: A: Comparing two different sequencing method by DEseq2
6.3 years ago swbarnes2 ★ 1.4k
0
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2
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2.7k
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Comment: C: Difference of difference, paired design
6.4 years ago swbarnes2 ★ 1.4k
0
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1
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2.7k
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Answer: A: Difference of difference, paired design
6.4 years ago swbarnes2 ★ 1.4k
0
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673
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Answer: A: Creating the correct design
6.4 years ago swbarnes2 ★ 1.4k
0
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1
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2.4k
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Comment: C: deseq2 pre filter rna seq
6.4 years ago swbarnes2 ★ 1.4k
0
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1
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3.1k
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Comment: C: Difference between gene-level test and transcript-level test with RATs (Relative
6.4 years ago swbarnes2 ★ 1.4k
0
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0
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1.0k
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Comment: C: More Info on results names
6.4 years ago swbarnes2 ★ 1.4k
1
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1
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1.0k
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Answer: A: Batch correction for two conditions two batches
6.4 years ago swbarnes2 ★ 1.4k
0
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1
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1.7k
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Answer: A: Deseq issues - pipeline all of a sudden stopped working
6.4 years ago swbarnes2 ★ 1.4k
0
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0
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1.6k
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Comment: C: How can I overcome the error of "No residual degrees of freedom in linear model
6.4 years ago swbarnes2 ★ 1.4k
0
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1
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2.4k
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Comment: C: DESeq2 compare all_vs_all levels error
6.4 years ago swbarnes2 ★ 1.4k
0
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1
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2.4k
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Answer: A: DESeq2 compare all_vs_all levels error
6.4 years ago swbarnes2 ★ 1.4k
0
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0
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599
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Comment: C: how to change PCA plot in ropls
6.4 years ago swbarnes2 ★ 1.4k
0
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1
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2.0k
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Answer: A: DESeq2 Interaction Term Interpretation for Microbiome Data
6.4 years ago swbarnes2 ★ 1.4k
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0
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1.4k
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Answer: A: DESeq2 log fold change
6.4 years ago swbarnes2 ★ 1.4k
0
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0
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1.9k
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Comment: C: How to add row data to DESeqDataSetFromMatrix
6.4 years ago swbarnes2 ★ 1.4k
2
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1
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659
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Does response on subset of data in DESeq
deseq2
updated 6.4 years ago by 43k • written 6.4 years ago by ★ 1.4k
0
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0
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4.2k
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Answer: A: Intercept result in DESeq2 two factor model
6.4 years ago swbarnes2 ★ 1.4k
2
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1
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4.5k
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Answer: A: DESeq2 logfoldchange and interaction in model
6.4 years ago swbarnes2 ★ 1.4k
2
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1
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3.1k
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Answer: C: Principal components in DESeq2
6.5 years ago swbarnes2 ★ 1.4k
0
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0
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1.8k
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Answer: A: Creating an Expression Set from a csv file or EXCEL file
6.5 years ago swbarnes2 ★ 1.4k
0
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0
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1.1k
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Comment: C: How to subset data
6.5 years ago swbarnes2 ★ 1.4k
0
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1
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1.1k
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Answer: A: How to subset data
6.5 years ago swbarnes2 ★ 1.4k
0
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1
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1.4k
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Comment: C: DESeQ2 design multiple conditions
6.5 years ago swbarnes2 ★ 1.4k
0
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1
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1.4k
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Answer: A: DESeQ2 design multiple conditions
6.5 years ago swbarnes2 ★ 1.4k
0
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0
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2.8k
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Comment: C: How to get the regression slope coefficient from DESeq2 analysis of continuous d
6.5 years ago swbarnes2 ★ 1.4k
0
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1
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5.4k
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Comment: C: FeatureCounts counts wrongly when quantifying mixed paired and unpaired reads
6.5 years ago swbarnes2 ★ 1.4k
0
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0
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3.3k
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Comment: C: Problem with construction of DESeqDataSet object
6.5 years ago swbarnes2 ★ 1.4k
2
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0
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4.3k
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Answer: A: biomaRt returns all NAs for hgnc_symbol
6.6 years ago swbarnes2 ★ 1.4k
2
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0
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4.6k
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Comment: C: Log2(RPKM) counts in Bioconductor
6.6 years ago swbarnes2 ★ 1.4k
0
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1
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3.7k
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Comment: C: Compare and filter two BAM files, one record at a time
6.6 years ago swbarnes2 ★ 1.4k
3
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2
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1.8k
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Answer: A: Appropriate experimental design for differential expresion
6.6 years ago swbarnes2 ★ 1.4k
1
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0
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1.8k
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Comment: C: Appropriate experimental design for differential expresion
6.6 years ago swbarnes2 ★ 1.4k
0
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0
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1.4k
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Comment: C: model design in rna seq - deseq2
6.6 years ago swbarnes2 ★ 1.4k
0
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0
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765
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Answer: A: Find the expected counts in DESeq2 output
6.7 years ago swbarnes2 ★ 1.4k
1
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0
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6.9k
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Answer: A: What are the methods to get count data per cell from single cell fastq given onl
6.7 years ago swbarnes2 ★ 1.4k
1
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0
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2.0k
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Answer: A: Simple csv import error
6.7 years ago swbarnes2 ★ 1.4k
0
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0
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1.6k
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Answer: A: Appropriate design formula for DESeq2 from principles
6.8 years ago swbarnes2 ★ 1.4k
1
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0
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10k
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Answer: A: How to find Top 10 expressed genes in DESeq2
6.8 years ago swbarnes2 ★ 1.4k
475 results • Page 9 of 10
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