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Comment: C: To analyze the overall variance, which one to choose, vst or DESeq2 normalized c
6.8 years ago Alan ▴ 20
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Comment: A: To analyze the overall variance, which one to choose, vst or DESeq2 normalized c
6.8 years ago Alan ▴ 20
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Comment: C: How to set up the Wald test testing for log2 fold change above a threshold, and
6.8 years ago Alan ▴ 20
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Comment: C: How to set up the Wald test testing for log2 fold change above a threshold, and
6.8 years ago Alan ▴ 20
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How to set up the Wald test testing for log2 fold change above a threshold, and interpret the result correctly?
deseq2
updated 6.8 years ago by 43k • written 6.8 years ago by ▴ 20
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Comment: C: Is it reasonable to run DESeq2 on only a subset of transcripts of the original r
6.8 years ago Alan ▴ 20
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Comment: C: Is it reasonable to run DESeq2 on only a subset of transcripts of the original r
6.8 years ago Alan ▴ 20
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Is it reasonable to run DESeq2 on only a subset of transcripts of the original raw count matrix?
deseq2
updated 6.8 years ago by 43k • written 6.8 years ago by ▴ 20
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Comment: C: DESeq2 plotCounts() function-what is the unit on y axis?
6.8 years ago Alan ▴ 20
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DESeq2 plotCounts() function-what is the unit on y axis?
deseq2
updated 6.8 years ago by 43k • written 6.8 years ago by ▴ 20
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