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Comment: C: Using Limma for common reference and paired samples
13.8 years ago Sharon Anbu ▴ 480
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3
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1.5k
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Using Limma for common reference and paired samples
updated 13.8 years ago by ★ 2.0k • written 13.8 years ago by ▴ 480
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0
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2.9k
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Comment: C: Querying dbSNP
15.1 years ago Sharon Anbu ▴ 480
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1
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2.9k
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Comment: C: Querying dbSNP
15.1 years ago Sharon Anbu ▴ 480
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0
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2.9k
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Comment: C: Querying dbSNP
15.1 years ago Sharon Anbu ▴ 480
0
votes
1
reply
2.9k
views
Comment: C: Querying dbSNP
15.1 years ago Sharon Anbu ▴ 480
0
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10
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2.9k
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Querying dbSNP
biomaRt biomaRt
updated 15.1 years ago by ★ 7.2k • written 15.1 years ago by ▴ 480
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0
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4.7k
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Comment: C: Installing Bioconductor with 'sudo' privilege
15.2 years ago Sharon Anbu ▴ 480
0
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7
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4.7k
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Installing Bioconductor with 'sudo' privilege
updated 15.2 years ago by ▴ 450 • written 15.2 years ago by ▴ 480
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0
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616
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Limma and ANOVA with repeated measures
limma limma
15.6 years ago Sharon Anbu ▴ 480
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0
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1.2k
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Limma and ANOVA with repeated measures
limma limma
15.6 years ago Sharon Anbu ▴ 480
0
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0
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922
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EBImage installation problem
EBImage EBImage
15.9 years ago Sharon Anbu ▴ 480
0
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1
reply
1.4k
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LumiBatch - Error in creating lumi object
updated 16.3 years ago by ★ 1.2k • written 16.3 years ago by ▴ 480
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0
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413
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Inter-individual variation - Limma.
16.8 years ago Sharon Anbu ▴ 480
0
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2
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1.0k
views
Robust Spline Normalization (lumi) - illumina data matrix
updated 16.8 years ago by ★ 1.2k • written 16.8 years ago by ▴ 480
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0
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315
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Handling batch effects in DE analysis.
16.8 years ago Sharon Anbu ▴ 480
0
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1
reply
606
views
LumiBatch Object - Help
updated 17.4 years ago by ▴ 320 • written 17.4 years ago by ▴ 480
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1
reply
495
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Sample size calculation - microarray experiemnt
updated 17.4 years ago by ▴ 340 • written 17.4 years ago by ▴ 480
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0
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450
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normalize.loess - warning message about convergence
17.6 years ago Sharon Anbu ▴ 480
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0
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344
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Limma - use of spot quality weight.
18.0 years ago Sharon Anbu ▴ 480
0
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0
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1.1k
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Comment: C: advice on absent present filtering needed
18.1 years ago Sharon Anbu ▴ 480
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0
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296
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3 factors with Limma.
18.1 years ago Sharon Anbu ▴ 480
0
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0
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548
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Comment: C: Reading 'rgu34a' probeset - D37951UTR#1_at
18.2 years ago Sharon Anbu ▴ 480
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3
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548
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Reading 'rgu34a' probeset - D37951UTR#1_at
updated 18.2 years ago by 67k • written 18.2 years ago by ▴ 480
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0
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437
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Limma: p.adjust(F.p.value) vs 'nestedF'
18.3 years ago Sharon Anbu ▴ 480
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0
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266
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Choosing results from LIMMA analysis
18.3 years ago Sharon Anbu ▴ 480
0
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0
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351
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simpleaffy and rhesuscdf - error.
18.4 years ago Sharon Anbu ▴ 480
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0
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297
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Error in using qc in simpleaffy.
18.4 years ago Sharon Anbu ▴ 480
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6
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1.7k
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Combining two datasets - help to use GeneMeta.
rae230a affy GeneMeta rae230a affy GeneMeta
updated 18.4 years ago by ▴ 230 • written 18.5 years ago by ▴ 480
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0
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335
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guidance for making appropriate design matrix - for limmma use
18.5 years ago Sharon Anbu ▴ 480
0
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0
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1.7k
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Comment: C: Combining two datasets - help to use GeneMeta.
18.5 years ago Sharon Anbu ▴ 480
0
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1
reply
432
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Comment: C: loading composite data (bg corrected) into limma
18.5 years ago Sharon Anbu ▴ 480
0
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3
replies
432
views
loading composite data (bg corrected) into limma
updated 18.5 years ago by 21k • written 18.5 years ago by ▴ 480
0
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0
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1.8k
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Comment: C: Error with GEOquery
18.6 years ago Sharon Anbu ▴ 480
0
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1
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1.8k
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Comment: C: Error with GEOquery
18.6 years ago Sharon Anbu ▴ 480
2
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5
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1.8k
views
Error with GEOquery
GEOquery GEOquery
updated 18.6 years ago by ▴ 170 • written 18.6 years ago by ▴ 480
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0
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2.3k
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Comment: C: Invalid fold-filter
18.8 years ago Sharon Anbu ▴ 480
0
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0
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501
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Distribution of DE genes on Chromosomes
18.8 years ago Sharon Anbu ▴ 480
0
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0
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1.9k
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Comment: C: No replicates and differential analysis !!
18.8 years ago Sharon Anbu ▴ 480
0
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6
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633
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2-way Anova analysis
18.9 years ago Sharon Anbu ▴ 480
0
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0
replies
633
views
Answer: A: 2-way Anova analysis
18.9 years ago Sharon Anbu ▴ 480
0
votes
1
reply
633
views
Answer: A: 2-way Anova analysis
18.9 years ago Sharon Anbu ▴ 480
0
votes
1
reply
633
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Answer: A: 2-way Anova analysis
18.9 years ago Sharon Anbu ▴ 480
0
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4
replies
898
views
From KEGG pathways to Affy ProbeID
updated 19.0 years ago by ▴ 90 • written 19.0 years ago by ▴ 480
0
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1
reply
907
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Comment: C: Working with low abundance probesets !!
19.0 years ago Sharon Anbu ▴ 480
0
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0
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907
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Answer: A: Working with low abundance probesets !!
19.0 years ago Sharon Anbu ▴ 480
0
votes
4
replies
907
views
Working with low abundance probesets !!
affy affy
19.0 years ago Sharon Anbu ▴ 480
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