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Comment: C: Using Limma for common reference and paired samples
14.2 years ago Sharon Anbu ▴ 480
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3
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1.6k
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Using Limma for common reference and paired samples
updated 14.2 years ago by ★ 2.0k • written 14.2 years ago by ▴ 480
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0
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3.2k
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Comment: C: Querying dbSNP
15.5 years ago Sharon Anbu ▴ 480
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1
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3.2k
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Comment: C: Querying dbSNP
15.5 years ago Sharon Anbu ▴ 480
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0
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3.2k
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Comment: C: Querying dbSNP
15.5 years ago Sharon Anbu ▴ 480
0
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1
reply
3.2k
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Comment: C: Querying dbSNP
15.5 years ago Sharon Anbu ▴ 480
0
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10
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3.2k
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Querying dbSNP
biomaRt biomaRt
updated 15.5 years ago by ★ 7.2k • written 15.5 years ago by ▴ 480
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0
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4.9k
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Comment: C: Installing Bioconductor with 'sudo' privilege
15.6 years ago Sharon Anbu ▴ 480
0
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7
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4.9k
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Installing Bioconductor with 'sudo' privilege
updated 15.6 years ago by ▴ 450 • written 15.6 years ago by ▴ 480
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0
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647
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Limma and ANOVA with repeated measures
limma limma
16.0 years ago Sharon Anbu ▴ 480
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0
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1.2k
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Limma and ANOVA with repeated measures
limma limma
16.0 years ago Sharon Anbu ▴ 480
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0
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959
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EBImage installation problem
EBImage EBImage
16.2 years ago Sharon Anbu ▴ 480
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1
reply
1.5k
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LumiBatch - Error in creating lumi object
updated 16.7 years ago by ★ 1.2k • written 16.7 years ago by ▴ 480
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0
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435
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Inter-individual variation - Limma.
17.2 years ago Sharon Anbu ▴ 480
0
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2
replies
1.1k
views
Robust Spline Normalization (lumi) - illumina data matrix
updated 17.2 years ago by ★ 1.2k • written 17.2 years ago by ▴ 480
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0
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333
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Handling batch effects in DE analysis.
17.2 years ago Sharon Anbu ▴ 480
0
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1
reply
638
views
LumiBatch Object - Help
updated 17.7 years ago by ▴ 320 • written 17.8 years ago by ▴ 480
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1
reply
532
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Sample size calculation - microarray experiemnt
updated 17.8 years ago by ▴ 340 • written 17.8 years ago by ▴ 480
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0
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487
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normalize.loess - warning message about convergence
18.0 years ago Sharon Anbu ▴ 480
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0
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363
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Limma - use of spot quality weight.
18.4 years ago Sharon Anbu ▴ 480
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0
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1.2k
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Comment: C: advice on absent present filtering needed
18.5 years ago Sharon Anbu ▴ 480
0
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0
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330
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3 factors with Limma.
18.5 years ago Sharon Anbu ▴ 480
0
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0
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596
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Comment: C: Reading 'rgu34a' probeset - D37951UTR#1_at
18.6 years ago Sharon Anbu ▴ 480
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3
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596
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Reading 'rgu34a' probeset - D37951UTR#1_at
updated 18.6 years ago by 68k • written 18.6 years ago by ▴ 480
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0
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461
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Limma: p.adjust(F.p.value) vs 'nestedF'
18.7 years ago Sharon Anbu ▴ 480
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0
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288
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Choosing results from LIMMA analysis
18.7 years ago Sharon Anbu ▴ 480
0
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0
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379
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simpleaffy and rhesuscdf - error.
18.8 years ago Sharon Anbu ▴ 480
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0
replies
319
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Error in using qc in simpleaffy.
18.8 years ago Sharon Anbu ▴ 480
0
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6
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1.8k
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Combining two datasets - help to use GeneMeta.
rae230a affy GeneMeta rae230a affy GeneMeta
updated 18.8 years ago by ▴ 230 • written 18.9 years ago by ▴ 480
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0
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359
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guidance for making appropriate design matrix - for limmma use
18.9 years ago Sharon Anbu ▴ 480
0
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0
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1.8k
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Comment: C: Combining two datasets - help to use GeneMeta.
18.9 years ago Sharon Anbu ▴ 480
0
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1
reply
478
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Comment: C: loading composite data (bg corrected) into limma
18.9 years ago Sharon Anbu ▴ 480
0
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3
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478
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loading composite data (bg corrected) into limma
updated 18.9 years ago by 21k • written 18.9 years ago by ▴ 480
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0
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1.9k
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Comment: C: Error with GEOquery
19.0 years ago Sharon Anbu ▴ 480
0
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1
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1.9k
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Comment: C: Error with GEOquery
19.0 years ago Sharon Anbu ▴ 480
2
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5
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1.9k
views
Error with GEOquery
GEOquery GEOquery
updated 19.0 years ago by ▴ 170 • written 19.0 years ago by ▴ 480
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0
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2.5k
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Comment: C: Invalid fold-filter
19.2 years ago Sharon Anbu ▴ 480
0
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0
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517
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Distribution of DE genes on Chromosomes
19.2 years ago Sharon Anbu ▴ 480
0
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0
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2.1k
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Comment: C: No replicates and differential analysis !!
19.2 years ago Sharon Anbu ▴ 480
0
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6
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713
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2-way Anova analysis
19.3 years ago Sharon Anbu ▴ 480
0
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0
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713
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Answer: A: 2-way Anova analysis
19.3 years ago Sharon Anbu ▴ 480
0
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1
reply
713
views
Answer: A: 2-way Anova analysis
19.3 years ago Sharon Anbu ▴ 480
0
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1
reply
713
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Answer: A: 2-way Anova analysis
19.3 years ago Sharon Anbu ▴ 480
0
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4
replies
960
views
From KEGG pathways to Affy ProbeID
updated 19.4 years ago by ▴ 90 • written 19.4 years ago by ▴ 480
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1
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1.0k
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Comment: C: Working with low abundance probesets !!
19.4 years ago Sharon Anbu ▴ 480
0
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0
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1.0k
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Answer: A: Working with low abundance probesets !!
19.4 years ago Sharon Anbu ▴ 480
0
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4
replies
1.0k
views
Working with low abundance probesets !!
affy affy
19.4 years ago Sharon Anbu ▴ 480
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