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Comment: C: Using Limma for common reference and paired samples
14.8 years ago Sharon Anbu ▴ 480
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3
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1.7k
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Using Limma for common reference and paired samples
updated 14.8 years ago by ★ 2.0k • written 14.8 years ago by ▴ 480
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0
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3.5k
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Comment: C: Querying dbSNP
16.0 years ago Sharon Anbu ▴ 480
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1
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3.5k
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Comment: C: Querying dbSNP
16.0 years ago Sharon Anbu ▴ 480
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0
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3.5k
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Comment: C: Querying dbSNP
16.0 years ago Sharon Anbu ▴ 480
0
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1
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3.5k
views
Comment: C: Querying dbSNP
16.0 years ago Sharon Anbu ▴ 480
0
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10
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3.5k
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Querying dbSNP
biomaRt biomaRt
updated 16.0 years ago by ★ 7.2k • written 16.0 years ago by ▴ 480
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0
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5.1k
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Comment: C: Installing Bioconductor with 'sudo' privilege
16.2 years ago Sharon Anbu ▴ 480
0
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7
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5.1k
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Installing Bioconductor with 'sudo' privilege
updated 16.2 years ago by ▴ 450 • written 16.2 years ago by ▴ 480
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0
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688
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Limma and ANOVA with repeated measures
limma limma
16.5 years ago Sharon Anbu ▴ 480
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0
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1.3k
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Limma and ANOVA with repeated measures
limma limma
16.5 years ago Sharon Anbu ▴ 480
0
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0
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996
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EBImage installation problem
EBImage EBImage
16.8 years ago Sharon Anbu ▴ 480
0
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1
reply
1.6k
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LumiBatch - Error in creating lumi object
updated 17.2 years ago by ★ 1.2k • written 17.2 years ago by ▴ 480
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0
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482
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Inter-individual variation - Limma.
17.7 years ago Sharon Anbu ▴ 480
0
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2
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1.2k
views
Robust Spline Normalization (lumi) - illumina data matrix
updated 17.7 years ago by ★ 1.2k • written 17.7 years ago by ▴ 480
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0
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381
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Handling batch effects in DE analysis.
17.7 years ago Sharon Anbu ▴ 480
0
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1
reply
715
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LumiBatch Object - Help
updated 18.3 years ago by ▴ 320 • written 18.3 years ago by ▴ 480
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1
reply
620
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Sample size calculation - microarray experiemnt
updated 18.3 years ago by ▴ 340 • written 18.3 years ago by ▴ 480
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0
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528
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normalize.loess - warning message about convergence
18.5 years ago Sharon Anbu ▴ 480
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0
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417
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Limma - use of spot quality weight.
18.9 years ago Sharon Anbu ▴ 480
0
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0
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1.4k
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Comment: C: advice on absent present filtering needed
19.0 years ago Sharon Anbu ▴ 480
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0
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372
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3 factors with Limma.
19.0 years ago Sharon Anbu ▴ 480
0
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0
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681
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Comment: C: Reading 'rgu34a' probeset - D37951UTR#1_at
19.1 years ago Sharon Anbu ▴ 480
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3
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681
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Reading 'rgu34a' probeset - D37951UTR#1_at
updated 19.1 years ago by 68k • written 19.1 years ago by ▴ 480
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0
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504
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Limma: p.adjust(F.p.value) vs 'nestedF'
19.2 years ago Sharon Anbu ▴ 480
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0
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338
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Choosing results from LIMMA analysis
19.2 years ago Sharon Anbu ▴ 480
0
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0
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446
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simpleaffy and rhesuscdf - error.
19.3 years ago Sharon Anbu ▴ 480
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0
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358
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Error in using qc in simpleaffy.
19.3 years ago Sharon Anbu ▴ 480
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6
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1.9k
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Combining two datasets - help to use GeneMeta.
rae230a affy GeneMeta rae230a affy GeneMeta
updated 19.4 years ago by ▴ 230 • written 19.4 years ago by ▴ 480
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0
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417
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guidance for making appropriate design matrix - for limmma use
19.4 years ago Sharon Anbu ▴ 480
0
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0
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1.9k
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Comment: C: Combining two datasets - help to use GeneMeta.
19.4 years ago Sharon Anbu ▴ 480
0
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1
reply
567
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Comment: C: loading composite data (bg corrected) into limma
19.4 years ago Sharon Anbu ▴ 480
0
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3
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567
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loading composite data (bg corrected) into limma
updated 19.4 years ago by 21k • written 19.4 years ago by ▴ 480
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0
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2.1k
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Comment: C: Error with GEOquery
19.5 years ago Sharon Anbu ▴ 480
0
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1
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2.1k
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Comment: C: Error with GEOquery
19.5 years ago Sharon Anbu ▴ 480
2
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5
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2.1k
views
Error with GEOquery
GEOquery GEOquery
updated 19.5 years ago by ▴ 170 • written 19.5 years ago by ▴ 480
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0
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2.8k
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Comment: C: Invalid fold-filter
19.7 years ago Sharon Anbu ▴ 480
0
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0
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557
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Distribution of DE genes on Chromosomes
19.7 years ago Sharon Anbu ▴ 480
0
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0
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2.3k
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Comment: C: No replicates and differential analysis !!
19.8 years ago Sharon Anbu ▴ 480
0
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0
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830
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Answer: A: 2-way Anova analysis
19.8 years ago Sharon Anbu ▴ 480
0
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6
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830
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2-way Anova analysis
19.8 years ago Sharon Anbu ▴ 480
0
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1
reply
830
views
Answer: A: 2-way Anova analysis
19.8 years ago Sharon Anbu ▴ 480
0
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1
reply
830
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Answer: A: 2-way Anova analysis
19.8 years ago Sharon Anbu ▴ 480
0
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4
replies
1.1k
views
From KEGG pathways to Affy ProbeID
updated 19.9 years ago by ▴ 90 • written 19.9 years ago by ▴ 480
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1
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1.1k
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Comment: C: Working with low abundance probesets !!
19.9 years ago Sharon Anbu ▴ 480
0
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0
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1.1k
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Answer: A: Working with low abundance probesets !!
19.9 years ago Sharon Anbu ▴ 480
0
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4
replies
1.1k
views
Working with low abundance probesets !!
affy affy
19.9 years ago Sharon Anbu ▴ 480
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