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Comment:
Comment: Error in checkFullRank(modelMatrix)
12 months ago
AZ
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Comment:
Comment: Removing Unwanted Variations
12 months ago
AZ
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Comment:
Comment: Permanent error in installing GenomeInfoDb
2.4 years ago
AZ
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810
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Comment:
Comment: Error in designing DESeq2 time pointed experiments
2.5 years ago
AZ
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810
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Comment:
Comment: Error in designing DESeq2 time pointed experiments
2.5 years ago
AZ
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1.5k
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Comment:
Comment: Three conditions and two time points
2.6 years ago
AZ
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1.5k
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Comment:
Comment: Three conditions and two time points
2.6 years ago
AZ
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1.5k
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Comment:
Comment: Three conditions and two time points
2.6 years ago • updated 2.5 years ago
AZ
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1
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1.5k
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Comment:
Comment: Three conditions and two time points
2.6 years ago
AZ
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Comment:
Comment: A permanent error in DESeq2
2.8 years ago
AZ
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1.4k
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Comment:
Comment: Getting differentially expressed genes for time points
3.2 years ago
AZ
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1.4k
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Comment:
Comment: Getting differentially expressed genes for time points
3.2 years ago
AZ
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1.4k
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Comment:
Comment: Getting differentially expressed genes for time points
3.2 years ago
AZ
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Comment:
C: Having TMM for GSEA
3.7 years ago
AZ
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912
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Comment:
C: Finding genes with loss of Heterozygosity
3.9 years ago
AZ
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1
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912
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Comment:
C: Finding genes with loss of Heterozygosity
4.0 years ago
AZ
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1
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912
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Comment:
C: Finding genes with loss of Heterozygosity
4.0 years ago
AZ
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912
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Comment:
C: Finding genes with loss of Heterozygosity
4.0 years ago
AZ
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1.7k
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Comment:
C: How I interpret this plot from pathview
4.5 years ago
AZ
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1
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1.7k
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Comment:
C: How I interpret this plot from pathview
4.5 years ago
AZ
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1.3k
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Comment:
C: Appropriate experimental design for differential expresion
5.1 years ago
AZ
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1.3k
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Comment:
C: Appropriate experimental design for differential expresion
5.1 years ago
AZ
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1
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1.3k
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Comment:
C: Appropriate experimental design for differential expresion
5.1 years ago
AZ
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Comment:
C: edgeR or wilcoxon rank test? Which is right?
5.3 years ago
AZ
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1.8k
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Comment:
C: edgeR or wilcoxon rank test? Which is right?
5.3 years ago
AZ
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976
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Comment:
C: Batch correction for a sets of genes
5.3 years ago
AZ
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1.9k
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Comment:
C: How can I use DESeq2 for exploratory analysis after batch effect removal using R
5.3 years ago
AZ
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1.2k
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Comment:
C: Different results with DESeq2 and EdgeR
5.3 years ago
AZ
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1.2k
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Comment:
C: Different results with DESeq2 and EdgeR
updated 5.3 years ago by
Gordon Smyth
50k • written 5.3 years ago by
AZ
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Comment:
C: Different results with DESeq2 and EdgeR
5.3 years ago
AZ
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12k
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Comment:
C: Nanostring analysis with limma
5.3 years ago
AZ
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1.2k
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Comment:
C: Can I use DESeq2 for special assays
5.3 years ago
AZ
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942
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Comment:
C: Correcting the batch effect in Edgeseq data
5.3 years ago
AZ
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18k
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Comment:
C: Plotting several heatmaps onto the same grid with the ComplexHeatmap package in
5.8 years ago
AZ
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3.2k
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Comment:
C: Single cells batch effects
5.8 years ago
AZ
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1
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26k
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Comment:
C: gene dispersion, what does it mean?
5.9 years ago
AZ
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1
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7.0k
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Comment:
C: DESeq2 time series analysis
5.9 years ago
AZ
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1
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48k
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Comment:
C: deseq2 filter the low counts
5.9 years ago
AZ
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48k
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Comment:
C: deseq2 filter the low counts
5.9 years ago
AZ
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1
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48k
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Comment:
C: deseq2 filter the low counts
5.9 years ago
AZ
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1
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11k
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Comment:
C: Deseq2 rlog or 'regular' normalization?
6.0 years ago
AZ
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1
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11k
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Comment:
C: Deseq2 rlog or 'regular' normalization?
6.0 years ago
AZ
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1
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11k
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Comment:
C: Deseq2 rlog or 'regular' normalization?
6.0 years ago
AZ
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