Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
1
reply
139
views
Answer: Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
11 hours ago Gordon Smyth 50k
0
votes
0
replies
252
views
Comment: Comment: Log-cpm values from limma
11 hours ago • updated 5 hours ago Gordon Smyth 50k
0
votes
0
replies
221
views
Comment: Comment: Method to find pathways different between 2 groups
2 days ago Gordon Smyth 50k
1
vote
1
reply
221
views
Answer: Answer: Method to find pathways different between 2 groups
4 days ago Gordon Smyth 50k
0
votes
0
replies
197
views
Comment: Comment: package goseq seems to be not available on the latest version of R
4 days ago Gordon Smyth 50k
0
votes
0
replies
355
views
Answer: Answer: limma Intercept vs No-intercept models completely changing DMR results?
6 days ago Gordon Smyth 50k
0
votes
1
reply
197
views
Answer: Answer: package goseq seems to be not available on the latest version of R
6 days ago • updated 5 days ago Gordon Smyth 50k
0
votes
0
replies
139
views
Answer: Answer: NEED FOR NESSASORY HELP
7 days ago Gordon Smyth 50k
0
votes
0
replies
123
views
Answer: Answer: Gene-by-sample covariates in limma
7 days ago Gordon Smyth 50k
3
votes
2
replies
571
views
Answer: Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
7 days ago Gordon Smyth 50k
1
vote
1
reply
1.2k
views
Comment: Comment: Why p value inconsistent when using different number of pathway score?
10 days ago Gordon Smyth 50k
1
vote
1
reply
195
views
Answer: Answer: Improving the design matrices vignette in RNAseq123
14 days ago Gordon Smyth 50k
1
vote
0
replies
183
views
Answer: Answer: Citation for edgeR user guide
16 days ago Gordon Smyth 50k
0
votes
1
reply
174
views
Answer: Answer: limma-voom: Calculate the log-fold change in gene expression within a sample
17 days ago Gordon Smyth 50k
1
vote
1
reply
445
views
Comment: Comment: FilterByExpr low counts with small sample size
19 days ago Gordon Smyth 50k
1
vote
1
reply
1.2k
views
Comment: Comment: Why p value inconsistent when using different number of pathway score?
19 days ago Gordon Smyth 50k
2
votes
1
reply
1.2k
views
Answer: Answer: Why p value inconsistent when using different number of pathway score?
19 days ago Gordon Smyth 50k
1
vote
0
replies
1.2k
views
Comment: Comment: Why p value inconsistent when using different number of pathway score?
19 days ago Gordon Smyth 50k
0
votes
1
reply
221
views
Answer: Answer: RNAseq:Technical replicates from different batches
20 days ago Gordon Smyth 50k
0
votes
0
replies
194
views
Comment: Comment: Finding DEGs by using edgeR
21 days ago Gordon Smyth 50k
3
votes
1
reply
445
views
Answer: Answer: FilterByExpr low counts with small sample size
21 days ago Gordon Smyth 50k
0
votes
1
reply
140
views
Answer: Answer: How to make DGEList and design matrix by edgeR package
21 days ago Gordon Smyth 50k
0
votes
1
reply
194
views
Answer: Answer: Finding DEGs by using edgeR
21 days ago Gordon Smyth 50k
3
votes
1
reply
252
views
Answer: Answer: Log-cpm values from limma
21 days ago Gordon Smyth 50k
0
votes
1
reply
445
views
Comment: Comment: FilterByExpr low counts with small sample size
22 days ago • updated 21 days ago Gordon Smyth 50k
0
votes
0
replies
1.3k
views
Comment: Comment: Batch correction and repeated measures
22 days ago Gordon Smyth 50k
0
votes
1
reply
326
views
Comment: Comment: Methylation Analysis experiment design using Limma
22 days ago Gordon Smyth 50k
0
votes
1
reply
326
views
Answer: Answer: Methylation Analysis experiment design using Limma
22 days ago Gordon Smyth 50k
1
vote
1
reply
938
views
Comment: Comment: Light difference when using coef vs omit a group when compare 3 groups.
23 days ago • updated 22 days ago Gordon Smyth 50k
1
vote
1
reply
938
views
Comment: Comment: Light difference when using coef vs omit a group when compare 3 groups.
23 days ago Gordon Smyth 50k
1
vote
0
replies
191
views
Answer: Answer: Differentially expressed genes in monocle pseudotime
24 days ago Gordon Smyth 50k
0
votes
0
replies
351
views
Answer: Answer: permutation test in edgeR
25 days ago • updated 19 days ago Gordon Smyth 50k
0
votes
0
replies
355
views
Answer: Answer: Why is my gene not significantly differentially expressed?
25 days ago Gordon Smyth 50k
1
vote
2
replies
938
views
Comment: Comment: Light difference when using coef vs omit a group when compare 3 groups.
26 days ago • updated 25 days ago Gordon Smyth 50k
2
votes
1
reply
938
views
Answer: Answer: Light difference when using coef vs omit a group when compare 3 groups.
28 days ago Gordon Smyth 50k
0
votes
0
replies
175
views
Answer: Answer: Limma design matrix only showing 3/4 treatments?
4 weeks ago Gordon Smyth 50k
1
vote
1
reply
2.0k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
4 weeks ago Gordon Smyth 50k
1
vote
0
replies
2.0k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
4 weeks ago Gordon Smyth 50k
0
votes
0
replies
252
views
Comment: Comment: Regressing out batch effects
5 weeks ago Gordon Smyth 50k
1
vote
1
reply
2.0k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
5 weeks ago Gordon Smyth 50k
0
votes
0
replies
956
views
Comment: Comment: limma models out of memory issue on Slurm HPC
5 weeks ago Gordon Smyth 50k
0
votes
1
reply
448
views
Comment: Comment: Using a change in a continuous explanatory variable to test changes in gene expr
5 weeks ago Gordon Smyth 50k
0
votes
1
reply
956
views
Comment: Comment: limma models out of memory issue on Slurm HPC
5 weeks ago Gordon Smyth 50k
1
vote
1
reply
448
views
Answer: Answer: Using a change in a continuous explanatory variable to test changes in gene expr
5 weeks ago Gordon Smyth 50k
0
votes
1
reply
181
views
Answer: Answer: edgeR analysis: glm functions and offset matrix
5 weeks ago Gordon Smyth 50k
1
vote
0
replies
956
views
Comment: Comment: limma models out of memory issue on Slurm HPC
5 weeks ago Gordon Smyth 50k
2
votes
1
reply
956
views
Comment: Comment: limma models out of memory issue on Slurm HPC
5 weeks ago Gordon Smyth 50k
0
votes
1
reply
956
views
Comment: Comment: limma models out of memory issue on Slurm HPC
5 weeks ago Gordon Smyth 50k
0
votes
1
reply
956
views
Comment: Comment: limma models out of memory issue on Slurm HPC
5 weeks ago Gordon Smyth 50k
0
votes
1
reply
956
views
Comment: Comment: limma models out of memory issue on Slurm HPC
5 weeks ago Gordon Smyth 50k
5,091 results • Page 1 of 102
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6