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For lumi package users: Change the names of Illumina ID mapping packages
Annotation lumi Annotation lumi
15.5 years ago Pan Du ★ 1.2k
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854
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lumi ID mapping issues
Annotation probe PROcess lumi Annotation probe PROcess lumi
15.5 years ago Pan Du ★ 1.2k
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0
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1.3k
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Answer: A: Lumi Error
15.5 years ago Pan Du ★ 1.2k
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0
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796
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Answer: A: Problem with new lumi/addNuID2lumi and old data
15.6 years ago Pan Du ★ 1.2k
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0
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592
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help with lumiB
probe probe
15.6 years ago Pan Du ★ 1.2k
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0
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594
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Possible problem with lumi function addControlData2lumi and proposed solution
Annotation lumi Annotation lumi
15.6 years ago Pan Du ★ 1.2k
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0
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718
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Answer: A: merging lumibatch objects
15.6 years ago Pan Du ★ 1.2k
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0
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1.4k
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Comment: C: How to convert Illumina ProbeIDs to nuIDs without nuID indexed annotation librar
15.7 years ago Pan Du ★ 1.2k
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1
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1.4k
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Answer: A: How to convert Illumina ProbeIDs to nuIDs without nuID indexed annotation librar
15.7 years ago Pan Du ★ 1.2k
0
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0
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822
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Answer: A: Lumi and Beadstudio 1.5.13
15.7 years ago Pan Du ★ 1.2k
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0
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966
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How to interpret the vst transformation of illumina
15.7 years ago Pan Du ★ 1.2k
0
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0
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769
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NuID conversions
15.7 years ago Pan Du ★ 1.2k
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0
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1.3k
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Answer: A: LumiBatch - Error in creating lumi object
15.7 years ago Pan Du ★ 1.2k
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2
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1.1k
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lumi question (About BeadStudio output columns)
Microarray lumi Microarray lumi
updated 15.8 years ago by ▴ 60 • written 15.8 years ago by ★ 1.2k
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1.1k
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Comment: C: lumi question (About BeadStudio output columns)
15.8 years ago Pan Du ★ 1.2k
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0
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1.8k
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Answer: A: illumina annotation packages vs. bgx manifests
15.8 years ago Pan Du ★ 1.2k
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0
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842
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Change of default normalization method in lumiN ( lumi package )
Normalization probe lumi Normalization probe lumi
15.9 years ago Pan Du ★ 1.2k
0
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1
reply
841
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lumiHumanAll.db, Gostats
Annotation Clustering probe convert Annotation Clustering probe convert
updated 15.9 years ago by ▴ 270 • written 15.9 years ago by ★ 1.2k
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0
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740
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lumi annotation package
Annotation lumiHumanV1 lumiMouseV1 lumiHumanV2 probe lumi Annotation lumiHumanV1 probe
16.0 years ago Pan Du ★ 1.2k
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0
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799
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Answer: A: lumiMouseV1 trouble
16.0 years ago Pan Du ★ 1.2k
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0
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715
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warning message of lumiR
Microarray Annotation probe convert lumi Microarray Annotation probe convert lumi
16.0 years ago Pan Du ★ 1.2k
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0
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684
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how to cite "lumi"?
Normalization lumi Normalization lumi
16.0 years ago Pan Du ★ 1.2k
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0
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825
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Answer: A: lumi annotation for Mouse Ref8 v1.1
16.0 years ago Pan Du ★ 1.2k
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0
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1.5k
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Comment: C: Pairs plots in lumi, plots look different?
16.0 years ago Pan Du ★ 1.2k
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1
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1.5k
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Comment: C: Pairs plots in lumi, plots look different?
16.0 years ago Pan Du ★ 1.2k
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2
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1.5k
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Answer: A: Pairs plots in lumi, plots look different?
16.0 years ago Pan Du ★ 1.2k
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0
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1.6k
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Comment: C: LumiBatch: problem when renaming samples
16.0 years ago Pan Du ★ 1.2k
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1
reply
1.3k
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About Illumina annotation packages lumixxxAll.db
Annotation lumiMouseV1 probe convert lumi Annotation lumiMouseV1 probe convert lumi
16.1 years ago Pan Du ★ 1.2k
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0
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1.3k
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Answer: A: About Illumina annotation packages lumixxxAll.db
16.1 years ago Pan Du ★ 1.2k
0
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0
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858
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Illumina annotation human v3
Annotation lumi Annotation lumi
16.1 years ago Pan Du ★ 1.2k
0
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0
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581
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Answer: A: Detection slot - Lumi
16.1 years ago Pan Du ★ 1.2k
0
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0
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611
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info su illumina
Genetics Annotation GO lumi Genetics Annotation GO lumi
16.1 years ago Pan Du ★ 1.2k
0
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0
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1.0k
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how to cite "lumi"?
Microarray Annotation Normalization Cancer lumi Microarray Annotation Normalization Cancer
16.1 years ago Pan Du ★ 1.2k
0
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0
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668
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For Illumina microarray users (Illumina changed ProbeID in the new Version)
Microarray Annotation Microarray Annotation
16.1 years ago Pan Du ★ 1.2k
0
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0
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321
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lumi: subset of QC slot in LumiBatch object
16.1 years ago Pan Du ★ 1.2k
0
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0
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1.4k
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Answer: A: Lumi: filtering and batch effects (combat)
16.2 years ago Pan Du ★ 1.2k
0
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0
replies
1.0k
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About Lumi nuID NAs
Annotation lumiMouseV1 probe lumi Annotation lumiMouseV1 probe lumi
16.2 years ago Pan Du ★ 1.2k
0
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0
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259
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asking help for combining two Illumina datasets with different IDs
16.3 years ago Pan Du ★ 1.2k
0
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0
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379
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asking help for lumi package ( Illumina quality control and VST )
16.3 years ago Pan Du ★ 1.2k
0
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0
replies
951
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Answer: A: Robust Spline Normalization (lumi) - illumina data matrix
16.3 years ago Pan Du ★ 1.2k
0
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0
replies
814
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VST advice (Illumina microarray)
16.3 years ago Pan Du ★ 1.2k
0
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0
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818
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Answer: A: Lumi package: control data for background correction
16.3 years ago Pan Du ★ 1.2k
0
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0
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904
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another quick question about Illumina annotation
Annotation AnnBuilder lumi Annotation AnnBuilder lumi
16.4 years ago Pan Du ★ 1.2k
0
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0
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276
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asking help for lumi package (annotation)
16.4 years ago Pan Du ★ 1.2k
0
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0
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516
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questions on lumi
graph lumi graph lumi
16.4 years ago Pan Du ★ 1.2k
0
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0
replies
303
views
Answer: A: asking help for lumi package
16.4 years ago Pan Du ★ 1.2k
0
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2
replies
832
views
About subsampling of VST in lumi
Cancer lumi Cancer lumi
updated 16.4 years ago by ▴ 50 • written 16.4 years ago by ★ 1.2k
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0
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832
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Comment: C: About subsampling of VST in lumi
16.4 years ago Pan Du ★ 1.2k
0
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0
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780
views
Answer: A: New version of BeadStudio - new Illumina data files
16.5 years ago Pan Du ★ 1.2k
0
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1
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1.1k
views
Comment: C: lumi: how is the controlData to be read and used?
16.6 years ago Pan Du ★ 1.2k
123 results • Page 2 of 3
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