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Comment: Scores used for DiffBind's dba.plotHeatmap
7 weeks ago
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Comment: Inconsistent results in DiffBind
4 months ago
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Comment: How to add a BioConductor package to a Docker image based on rocker/shiny
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20 months ago
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Comment: Using DiffBind blacklists and greylists with results mapped to BDGP6
2.3 years ago
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Comment: TOAST output
3.0 years ago
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Comment: TOAST output
3.0 years ago
Sam
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Comment: DESeq2 unmix function
3.0 years ago
Sam
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Comment: ChIPseeker: Annotating Peaks with both upstream and downstream gene
3.1 years ago
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Comment: DiffBind how to retrieve normalized count matrix of ATAC-seq data
3.1 years ago
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Comment: DiffBind how to retrieve normalized count matrix of ATAC-seq data
3.1 years ago
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Comment: DiffBind how to retrieve normalized count matrix of ATAC-seq data
3.1 years ago
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3.1 years ago
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3.1 years ago
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Comment: A mismatch between DiffBind's results and the same results retreieved as DESeq2
3.1 years ago
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Comment: How sensitive is DiffBind to Deseq2 assumptions ?
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Comment: Learning DiffBind - some basic questions
3.1 years ago
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Comment: What is the correct use of removeBatchEffect's design parameter
3.1 years ago
Sam
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Comment: An attempt to better understand DESeq2 dispersion estimation
3.1 years ago
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Comment: Using DiffBind blacklists and greylists with results mapped to BDGP6
3.2 years ago
Sam
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Comment: Using DiffBind blacklists and greylists with results mapped to BDGP6
3.2 years ago • updated 3.1 years ago
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Comment: Using DiffBind blacklists and greylists with results mapped to BDGP6
3.2 years ago • updated 3.1 years ago
Sam
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Comment: An attempt to better understand DESeq2 dispersion estimation
3.2 years ago
Sam
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Comment: Using DiffBind blacklists and greylists with results mapped to BDGP6
3.2 years ago
Sam
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1.8k
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Comment: Learning DiffBind - some basic questions
3.2 years ago
Sam
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Comment: What is the correct use of removeBatchEffect's design parameter
3.2 years ago
Sam
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Comment: What is the correct use of removeBatchEffect's design parameter
3.2 years ago
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Comment: Does DiffBind correctly designate peaks with very small fold-change to be statis
3.3 years ago
Sam
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1.8k
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Comment: Learning DiffBind - some basic questions
3.3 years ago
Sam
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4.6k
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Comment: Using DiffBind blacklists and greylists with results mapped to BDGP6
3.3 years ago
Sam
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4.6k
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Comment: Using DiffBind blacklists and greylists with results mapped to BDGP6
3.3 years ago
Sam
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1.8k
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Comment: Learning DiffBind - some basic questions
3.4 years ago
Sam
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4.9k
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Comment: What is the correct use of removeBatchEffect's design parameter
3.5 years ago
Sam
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C: What is the correct use of removeBatchEffect's design parameter
3.6 years ago
Sam
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C: What is the correct use of removeBatchEffect's design parameter
3.7 years ago
Sam
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C: How to use removeBatchEffect for removing effect of multiple confounding variabl
3.7 years ago
Sam
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Comment:
C: What is the correct use of removeBatchEffect's design parameter
3.7 years ago
Sam
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4.9k
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C: What is the correct use of removeBatchEffect's design parameter
3.7 years ago
Sam
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Comment:
C: How to compare a single RNA-Seq sample with microarray samples?
3.9 years ago
Sam
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1.0k
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C: How to compare a single RNA-Seq sample with microarray samples?
3.9 years ago
Sam
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17k
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C: standard error value (lfcSE) returned by DeSeq2
4.2 years ago
Sam
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44k
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Comment:
C: Batch correction in DESeq2
4.2 years ago
Sam
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44k
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Comment:
C: Batch correction in DESeq2
4.2 years ago
Sam
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8.6k
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C: removeBatchEffect options: design and covariates
4.2 years ago
Sam
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8.6k
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Comment:
C: Can NanoString data be analyzed using DESeq2?
4.8 years ago
Sam
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