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Comment: Comment: seqlevelsStyle() not working
13 months ago Kai Hu ▴ 70
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4
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seqlevelsStyle() not working
ensembldb genomei GenomeInfoDb
written 13 months ago by ▴ 70
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Answer: Answer: ChIPpeakAnno annotatePeakInBatch output
17 months ago Kai Hu ▴ 70
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Comment: Comment: ChIPpeakAnno: S.lycopersicum annotation missing
19 months ago Kai Hu ▴ 70
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Comment: Comment: ChIPpeakAnno: S.lycopersicum annotation missing
19 months ago Kai Hu ▴ 70
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Comment: Comment: ChIPpeakAnno: S.lycopersicum annotation missing
19 months ago Kai Hu ▴ 70
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Comment: Comment: ChIPpeakAnno: S.lycopersicum annotation missing
19 months ago Kai Hu ▴ 70
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Answer: Answer: annotate peaks using a custom genome
23 months ago Kai Hu ▴ 70
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Comment: Comment: How to apply ChIPpeakAnno to your Granger object to annotate the peaks?
23 months ago Kai Hu ▴ 70
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Comment: Comment: DESeq2::plotPCA()
2.1 years ago Kai Hu ▴ 70
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2
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4.1k
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DESeq2::plotPCA()
DESeq2
2.1 years ago Kai Hu ▴ 70
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Comment: Comment: peak annotation
2.9 years ago Kai Hu ▴ 70
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2.1k
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Answer: Answer: another problem when converting bed to granges using togranges
3.1 years ago Kai Hu ▴ 70
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1.2k
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Comment: Comment: ChIP-seq or CUT&RUN enrichment
3.1 years ago Kai Hu ▴ 70
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3.2k
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Comment: Comment: Problem converting a bed file to granges using togranges chippeakanno
3.1 years ago Kai Hu ▴ 70
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3.2k
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Answer: Answer: Problem converting a bed file to granges using togranges chippeakanno
3.1 years ago Kai Hu ▴ 70
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4.1k
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Comment: Comment: Error in data.frame(..., check.names = FALSE) : arguments imply differing num
3.2 years ago Kai Hu ▴ 70
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3
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4.1k
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Answer: Answer: Error in data.frame(..., check.names = FALSE) : arguments imply differing num
3.2 years ago Kai Hu ▴ 70
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1.1k
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Comment: Comment: CRISPRseek package: findgRNAs error
3.4 years ago Kai Hu ▴ 70
1
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1
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3.2k
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Answer: Answer: ChIPpeakAnno findOverlapsOfPeaks error: "Error in FUN(X[[i]], ...) : Inputs cont
3.4 years ago Kai Hu ▴ 70
2
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1.7k
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Answer: Answer: Hello how to use ChIPpeakAnno for latest version of ensemble genome aligned data
4.1 years ago Kai Hu ▴ 70
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