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Chris Seidel
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5.1 years ago • updated 5.0 years ago
Leonardo Collado Torres
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Comment: phenotypic table for DESeqDataSetFromHTSeqCount
by
Michael Love
33k
Oh sorry I didn't see any code including a `directory` argument in your post.
Then to debug do:
```
file.exists(file.path(directory, samp…
Comment: phenotypic table for DESeqDataSetFromHTSeqCount
by
rbenel
▴
20
The vector contains just `FALSE`...
So where is the `directory` parameter set to read files from? Currently I have `directory` set to a t…
Comment: `aperm`, `realize`, `writeHDF5Array`, and `ReshapedHDF5Array` are block size awa
by
Koki
•
0
Ok, I got the gist of it.
If I have the same situation of the previous case (https://support.bioconductor.org/p/9136736/), where I have to…
Answer: DESeq2 Design matrix
by
Michael Love
33k
Usually one would use a single design and extract comparisons. With a complex design, you should partner with someone familiar with linear …
Comment: `aperm`, `realize`, `writeHDF5Array`, and `ReshapedHDF5Array` are block size awa
by
Hervé Pagès
14k
> For example, the following codes use a combination of delayed operation and block-processed operation but the code as a whole does not ex…
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