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minfi release 1.8
SNP Annotation minfi bumphunter SNP Annotation minfi bumphunter
updated 12.1 years ago by ▴ 30 • written 12.1 years ago by ★ 6.5k
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Answer: A: dmrFinder error
12.1 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: 450k annotation packages compatible version and analysis with blockFinder (minfi
12.1 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: 450k annotation packages compatible version and analysis with blockFinder (minfi
12.1 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: minfi: RGChannelSet for illumina 27k data
12.1 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: 450k annotation packages compatible version and analysis with blockFinder (minfi
12.1 years ago Kasper Daniel Hansen ★ 6.5k
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1.7k
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Comment: C: edgeR adding RefSeq IDs
12.1 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: mifi unable to install by bioLite
12.2 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: Lumi failed to load
12.2 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: Plots with transparent background in ggbio.
12.2 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: combining/merging several ExpressionSet objects from SCAN
12.3 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: combining/merging several ExpressionSet objects from SCAN
12.3 years ago Kasper Daniel Hansen ★ 6.5k
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3.4k
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Comment: C: segfault ReadAffy cause 'memory not mapped'
12.4 years ago Kasper Daniel Hansen ★ 6.5k
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2.2k
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Comment: C: Filtering BAM files by start position for VariantTools
12.4 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: AnnotationHub man page improvements
12.4 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: AnnotationHub man page improvements
12.4 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: about running gsva on mac
12.4 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: likely bug in cbind() for DataFrame
12.4 years ago Kasper Daniel Hansen ★ 6.5k
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AnnotationHub man page improvements
updated 12.4 years ago by ★ 7.2k • written 12.4 years ago by ★ 6.5k
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likely bug in cbind() for DataFrame
updated 12.4 years ago by ★ 11k • written 12.4 years ago by ★ 6.5k
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2.0k
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Answer: A: AnnotationHub man page improvements
12.4 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: bumphunter::matchGenes and all=TRUE
12.4 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: IRanges is broken in Cygwin (mingw/math.h)
12.4 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: simple
12.4 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: how to do a paired analysis with minfi?
12.4 years ago Kasper Daniel Hansen ★ 6.5k
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1.5k
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bsseq in devel
bsseq bsseq
updated 12.4 years ago by ★ 4.2k • written 12.4 years ago by ★ 6.5k
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Answer: A: Disparity between MethylLumiSet (methylumi) and RGChannelSet (minfi) - treatment
12.4 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: diffbind, paired end reads
12.5 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: Rgraphviz::pieGlyph default values with warning
12.5 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: Rgraphviz::pieGlyph default values with warning
12.5 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: Problem in installing Rgraphviz
12.5 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: Problem in installing Rgraphviz
12.5 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: minfi: Meth and Unmeth = 0 resulting in beta = NaN?
12.5 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: minfi: Problem with GenomicMethylSet
12.5 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: minfi: Problem with GenomicMethylSet
12.5 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: [Bioc] RNAseq less sensitive than microarrays? Is it a statistical issue?
12.6 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: coverage on very large ReadGappedAlignmentsObject
12.6 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: Analyzing "differential variability" of methylation (and gene expression)
12.6 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: BiocInstaller on R-devel
12.7 years ago Kasper Daniel Hansen ★ 6.5k
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BiocInstaller on R-devel
BiocInstaller BiocInstaller
updated 12.7 years ago by 25k • written 12.7 years ago by ★ 6.5k
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Questions about the MINFI package:
Normalization minfi Normalization minfi
12.7 years ago Kasper Daniel Hansen ★ 6.5k
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2.4k
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using offsets from EDASeq and cqn for edgeR
GO edgeR cqn EDASeq GO edgeR cqn EDASeq
12.7 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: using offsets from EDASeq and cqn for edgeR
12.7 years ago Kasper Daniel Hansen ★ 6.5k
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1.6k
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Answer: A: Limit on number of sequence files for forging a BSgenome
12.7 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: BiocGenerics 0.5.6 not loading properly
12.7 years ago Kasper Daniel Hansen ★ 6.5k
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2.2k
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Comment: C: Calculate Outer Positions of GappedAlignmentPairs
12.7 years ago Kasper Daniel Hansen ★ 6.5k
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3.7k
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Comment: C: BiocGenerics 0.5.6 not loading properly
12.7 years ago Kasper Daniel Hansen ★ 6.5k
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3.7k
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Comment: C: BiocGenerics 0.5.6 not loading properly
12.7 years ago Kasper Daniel Hansen ★ 6.5k
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1.4k
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Comment: C: Distance btw sequences from different sets
12.7 years ago Kasper Daniel Hansen ★ 6.5k
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startup options
IRanges IRanges
updated 12.7 years ago by ★ 4.3k • written 12.7 years ago by ★ 6.5k
733 results • Page 5 of 15
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