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minfi release 1.8
SNP Annotation minfi bumphunter SNP Annotation minfi bumphunter
updated 11.1 years ago by ▴ 30 • written 11.1 years ago by ★ 6.5k
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Answer: A: dmrFinder error
11.1 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: 450k annotation packages compatible version and analysis with blockFinder (minfi
11.2 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: 450k annotation packages compatible version and analysis with blockFinder (minfi
11.2 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: minfi: RGChannelSet for illumina 27k data
11.2 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: 450k annotation packages compatible version and analysis with blockFinder (minfi
11.2 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: edgeR adding RefSeq IDs
11.2 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: mifi unable to install by bioLite
11.2 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: Lumi failed to load
11.2 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: Plots with transparent background in ggbio.
11.2 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: combining/merging several ExpressionSet objects from SCAN
11.4 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: combining/merging several ExpressionSet objects from SCAN
11.4 years ago Kasper Daniel Hansen ★ 6.5k
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2.8k
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Comment: C: segfault ReadAffy cause 'memory not mapped'
11.4 years ago Kasper Daniel Hansen ★ 6.5k
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1.9k
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Comment: C: Filtering BAM files by start position for VariantTools
11.4 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: AnnotationHub man page improvements
11.4 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: AnnotationHub man page improvements
11.4 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: about running gsva on mac
11.4 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: likely bug in cbind() for DataFrame
11.4 years ago Kasper Daniel Hansen ★ 6.5k
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AnnotationHub man page improvements
updated 11.4 years ago by ★ 7.2k • written 11.4 years ago by ★ 6.5k
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likely bug in cbind() for DataFrame
updated 11.4 years ago by ★ 11k • written 11.4 years ago by ★ 6.5k
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1.6k
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Answer: A: AnnotationHub man page improvements
11.4 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: bumphunter::matchGenes and all=TRUE
11.4 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: IRanges is broken in Cygwin (mingw/math.h)
11.4 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: simple
11.4 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: how to do a paired analysis with minfi?
11.5 years ago Kasper Daniel Hansen ★ 6.5k
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bsseq in devel
bsseq bsseq
updated 11.5 years ago by ★ 4.2k • written 11.5 years ago by ★ 6.5k
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Answer: A: Disparity between MethylLumiSet (methylumi) and RGChannelSet (minfi) - treatment
11.5 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: diffbind, paired end reads
11.5 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: Rgraphviz::pieGlyph default values with warning
11.5 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: Rgraphviz::pieGlyph default values with warning
11.5 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: Problem in installing Rgraphviz
11.5 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: Problem in installing Rgraphviz
11.5 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: minfi: Meth and Unmeth = 0 resulting in beta = NaN?
11.6 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: minfi: Problem with GenomicMethylSet
11.6 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: minfi: Problem with GenomicMethylSet
11.6 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: [Bioc] RNAseq less sensitive than microarrays? Is it a statistical issue?
11.6 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: coverage on very large ReadGappedAlignmentsObject
11.6 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: Analyzing "differential variability" of methylation (and gene expression)
11.6 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: BiocInstaller on R-devel
11.7 years ago Kasper Daniel Hansen ★ 6.5k
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BiocInstaller on R-devel
BiocInstaller BiocInstaller
updated 11.7 years ago by 25k • written 11.7 years ago by ★ 6.5k
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Questions about the MINFI package:
Normalization minfi Normalization minfi
11.7 years ago Kasper Daniel Hansen ★ 6.5k
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2.1k
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using offsets from EDASeq and cqn for edgeR
GO edgeR cqn EDASeq GO edgeR cqn EDASeq
11.7 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: using offsets from EDASeq and cqn for edgeR
11.7 years ago Kasper Daniel Hansen ★ 6.5k
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Answer: A: Limit on number of sequence files for forging a BSgenome
11.7 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: BiocGenerics 0.5.6 not loading properly
11.8 years ago Kasper Daniel Hansen ★ 6.5k
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1.8k
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Comment: C: Calculate Outer Positions of GappedAlignmentPairs
11.8 years ago Kasper Daniel Hansen ★ 6.5k
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3.2k
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Comment: C: BiocGenerics 0.5.6 not loading properly
11.8 years ago Kasper Daniel Hansen ★ 6.5k
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3.2k
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Comment: C: BiocGenerics 0.5.6 not loading properly
11.8 years ago Kasper Daniel Hansen ★ 6.5k
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Comment: C: Distance btw sequences from different sets
11.8 years ago Kasper Daniel Hansen ★ 6.5k
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startup options
IRanges IRanges
updated 11.8 years ago by ★ 4.3k • written 11.8 years ago by ★ 6.5k
733 results • Page 5 of 15
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