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47k
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Answer: A: error in hclust function
12.9 years ago James F. Reid ▴ 610
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15k
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Answer: A: error under "hclust" for expression data
13.0 years ago James F. Reid ▴ 610
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0
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971
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Answer: A: all miRNAs related to a specific keyword, such as glioblastoma
13.1 years ago James F. Reid ▴ 610
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0
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1.6k
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Comment: C: eset from GEOqury pkg
13.1 years ago James F. Reid ▴ 610
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1
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1.6k
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Answer: A: eset from GEOqury pkg
13.1 years ago James F. Reid ▴ 610
0
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1.4k
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Answer: A: Difficulty in AnnotatedDataFrame
13.2 years ago James F. Reid ▴ 610
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1.4k
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Answer: A: Difficulty in AnnotatedDataFrame
13.2 years ago James F. Reid ▴ 610
0
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1
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836
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Biobase typo in example of AnnotatedDataFrame man page
updated 13.2 years ago by 25k • written 13.2 years ago by ▴ 610
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1.2k
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Answer: A: getGEO error?
13.2 years ago James F. Reid ▴ 610
1
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0
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2.6k
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Answer: A: miRNA- KEGG
13.2 years ago James F. Reid ▴ 610
0
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0
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4.7k
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Answer: A: a problem in reading in cel files
13.2 years ago James F. Reid ▴ 610
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0
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6.0k
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Answer: A: How to extract Phenotype data from GSE
13.5 years ago James F. Reid ▴ 610
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0
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3.0k
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Answer: A: package/function for median center & unit variance
13.8 years ago James F. Reid ▴ 610
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1
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1.3k
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Answer: A: Bug in hyperGTest for KEGGHyperGParams?
13.8 years ago James F. Reid ▴ 610
0
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1
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1.3k
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Answer: A: illumina beadarray GEO files
13.9 years ago James F. Reid ▴ 610
0
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0
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5.3k
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Comment: C: CEL files not valid?
13.9 years ago James F. Reid ▴ 610
0
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0
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952
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Comment: C: How to quikly know whether two genes are in the same pathway or not?
13.9 years ago James F. Reid ▴ 610
0
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0
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2.0k
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Answer: A: How to extract Phenotype data from GSE
14.0 years ago James F. Reid ▴ 610
0
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0
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2.0k
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Comment: C: microRNA hg build?
14.0 years ago James F. Reid ▴ 610
0
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1
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2.0k
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Comment: C: microRNA hg build?
14.0 years ago James F. Reid ▴ 610
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0
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1.5k
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Answer: A: gene SOX6 in HT HG-U133A
14.0 years ago James F. Reid ▴ 610
0
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1
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2.5k
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Comment: C: GoStats and microRNA pipeline using Biomart
14.1 years ago James F. Reid ▴ 610
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1
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2.5k
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Comment: C: GoStats and microRNA pipeline using Biomart
14.1 years ago James F. Reid ▴ 610
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0
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2.0k
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Comment: C: How do I parse HTML table using RCurl?
14.1 years ago James F. Reid ▴ 610
0
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1
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2.0k
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Answer: A: How do I parse HTML table using RCurl?
14.1 years ago James F. Reid ▴ 610
0
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1
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2.8k
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Answer: A: arrayQualityMetrics error
14.2 years ago James F. Reid ▴ 610
0
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1
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1.8k
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Comment: C: Time course experiment....
14.2 years ago James F. Reid ▴ 610
0
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1
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1.7k
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GEOquery GSElimits
GEOquery GEOquery
updated 14.4 years ago by 21k • written 14.4 years ago by ▴ 610
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0
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664
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obtain a list of possible oncogenes from the annotation packages?
14.4 years ago James F. Reid ▴ 610
0
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0
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2.1k
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Answer: A: arrayQualityMetrics not producing all diagnostic plots
14.5 years ago James F. Reid ▴ 610
0
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10
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2.1k
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arrayQualityMetrics not producing all diagnostic plots
arrayQualityMetrics arrayQualityMetrics
14.5 years ago James F. Reid ▴ 610
0
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2
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2.1k
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Comment: C: arrayQualityMetrics not producing all diagnostic plots
14.5 years ago James F. Reid ▴ 610
0
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1
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2.1k
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Comment: C: arrayQualityMetrics not producing all diagnostic plots
14.5 years ago James F. Reid ▴ 610
0
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1
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2.1k
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Comment: C: arrayQualityMetrics not producing all diagnostic plots
14.5 years ago James F. Reid ▴ 610
0
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0
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1.4k
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Answer: A: Retrieving MAQC data from GEO using GEOquery
14.8 years ago James F. Reid ▴ 610
0
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0
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1.1k
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Answer: A: targetscan
14.9 years ago James F. Reid ▴ 610
0
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0
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1.5k
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Answer: A: Error in lm.fit(design, t(M)) from GEO dataset
14.9 years ago James F. Reid ▴ 610
0
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1
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2.5k
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Comment: C: Mapping NCBI accession numbers to GO terms
14.9 years ago James F. Reid ▴ 610
0
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0
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1.5k
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Answer: A: GEOquery, GSE, and MAList
15.0 years ago James F. Reid ▴ 610
0
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1
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1.1k
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GOstats/Category hyperGTest gene universe problem
Annotation Pathways GO Annotation Pathways GO
updated 15.0 years ago by ★ 7.2k • written 15.0 years ago by ▴ 610
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0
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1.8k
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Comment: C: Reg: PCA in bioconductor
15.0 years ago James F. Reid ▴ 610
0
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0
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1.3k
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Answer: A: filtering in GSEABase package
15.1 years ago James F. Reid ▴ 610
0
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0
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1.3k
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Answer: A: Is there anyway to map a set of EST id's to genBank accessions?
15.2 years ago James F. Reid ▴ 610
0
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0
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1.1k
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Answer: A: what is good book to learn Next Gen. Seq. analysis?
15.2 years ago James F. Reid ▴ 610
0
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0
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1.2k
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Answer: A: extracting all GO terms from GOHyperGResult object?
15.3 years ago James F. Reid ▴ 610
0
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0
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1.8k
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Answer: A: problem connecting to bioMart - NOT proxy error
15.4 years ago James F. Reid ▴ 610
0
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1
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1.3k
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building an annotation library from scratch
miRNA Annotation Organism db0 AnnotationDbi microRNA miRNA Annotation Organism db0
updated 15.5 years ago by ★ 7.2k • written 15.5 years ago by ▴ 610
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0
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2.1k
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Comment: C: error while using genefilter's nsFilter: could not find function "hgug4112a.db_d
15.5 years ago James F. Reid ▴ 610
0
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0
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1.0k
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Answer: A: automatically loading of annotation package
15.7 years ago James F. Reid ▴ 610
0
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0
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2.1k
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Comment: C: How to use GEOquery to extract more than the default information from a GSE
15.8 years ago James F. Reid ▴ 610
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