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Comment: C: Limma, SAM and Fold Change Calculation
updated 7.7 years ago by 52k • written 17.4 years ago by ▴ 900
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2
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7.4k
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Comment: C: Limma, SAM and Fold Change Calculation
updated 7.7 years ago by 52k • written 17.4 years ago by ▴ 900
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0
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2.5k
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Answer: C: lmFit only deals with numerical values (data matrix object)?
updated 10.0 years ago by 52k • written 13.7 years ago by ▴ 900
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0
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2.4k
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Comment: C: Linkage Disequilibrium Analysis
12.5 years ago Holger Schwender ▴ 900
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0
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1.7k
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Comment: C: Siggenes SAM analysis: log2 transformation and Understanding output
12.8 years ago Holger Schwender ▴ 900
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0
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1.3k
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Answer: A: siggenes parameters
13.5 years ago Holger Schwender ▴ 900
0
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0
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1.2k
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Answer: A: RMA (affy) followed by SAM (samr)
13.6 years ago Holger Schwender ▴ 900
0
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0
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1.4k
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Answer: A: siggenes sam2excel Error
13.7 years ago Holger Schwender ▴ 900
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1
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1.4k
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Answer: A: siggenes sam2excel Error
13.7 years ago Holger Schwender ▴ 900
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1
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1.4k
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Answer: A: prepare data matrix for siggenes
13.7 years ago Holger Schwender ▴ 900
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0
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1.2k
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Answer: A: SAM results
14.1 years ago Holger Schwender ▴ 900
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0
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976
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Answer: A: selection of dif.exp.genes defining FDR in SAM
14.5 years ago Holger Schwender ▴ 900
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0
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1.9k
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Answer: A: Interpreting the delta table from SAM
14.5 years ago Holger Schwender ▴ 900
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0
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1.4k
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Answer: A: Changes in siggenes?
14.9 years ago Holger Schwender ▴ 900
0
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0
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1.4k
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Comment: C: Patent issues of classification algorithms
15.0 years ago Holger Schwender ▴ 900
0
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0
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1.2k
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Answer: A: R: Minor problem with siggenes's command sam2excel when entrez=TRUE
15.4 years ago Holger Schwender ▴ 900
0
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0
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1.1k
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Answer: A: Minor problem with siggenes's command sam2excel when entrez=TRUE
15.4 years ago Holger Schwender ▴ 900
0
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0
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673
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Error message when working with sam
Annotation Annotation
15.4 years ago Holger Schwender ▴ 900
0
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0
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940
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Comment: C: P-values returned from siggenes's sam() function
15.6 years ago Holger Schwender ▴ 900
0
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2
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940
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P-values returned from siggenes's sam() function
updated 15.6 years ago by ▴ 320 • written 15.6 years ago by ▴ 900
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0
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831
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Comment: C: Error message when working with sam
15.7 years ago Holger Schwender ▴ 900
0
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0
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808
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Answer: A: Filtering SAM results
15.7 years ago Holger Schwender ▴ 900
0
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0
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1.1k
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Answer: A: SNP analysis
15.8 years ago Holger Schwender ▴ 900
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1
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3.7k
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Comment: C: Heatmap problem
15.9 years ago Holger Schwender ▴ 900
0
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0
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1.2k
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Comment: C: Limma without eBayes correction
15.9 years ago Holger Schwender ▴ 900
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0
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1.3k
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Comment: C: Siggenes/SAM Error
16.5 years ago Holger Schwender ▴ 900
0
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1
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1.3k
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Comment: C: Siggenes/SAM Error
16.5 years ago Holger Schwender ▴ 900
0
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1
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1.3k
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Answer: A: Siggenes/SAM Error
16.5 years ago Holger Schwender ▴ 900
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0
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1.2k
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Comment: C: more samr woes
16.6 years ago Holger Schwender ▴ 900
0
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0
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2.6k
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Comment: C: SAM analysis : samr package vs siggenes package
16.7 years ago Holger Schwender ▴ 900
0
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1
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2.6k
views
Answer: A: SAM analysis : samr package vs siggenes package
16.7 years ago Holger Schwender ▴ 900
0
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0
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1.8k
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Comment: C: SAM siggenes number of permutations
16.9 years ago Holger Schwender ▴ 900
0
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0
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1.8k
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Comment: C: SAM siggenes number of permutations
16.9 years ago Holger Schwender ▴ 900
0
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0
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1.8k
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Comment: C: SAM siggenes number of permutations
16.9 years ago Holger Schwender ▴ 900
0
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1
reply
1.8k
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Comment: C: SAM siggenes number of permutations
16.9 years ago Holger Schwender ▴ 900
0
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0
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1.3k
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Inf values using SAM (package=siggenes)
Annotation Survival Cancer genefilter affy limma maDB affyio Annotation Survival Cancer
17.0 years ago Holger Schwender ▴ 900
0
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1
reply
786
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Answer: A: siggenes fc threshold
17.0 years ago Holger Schwender ▴ 900
0
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0
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533
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Answer: A: Question on SAM output
17.1 years ago Holger Schwender ▴ 900
0
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0
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418
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Answer: A: Problem of using MultiClass SAM (siggenes package)
17.1 years ago Holger Schwender ▴ 900
0
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0
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1.2k
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Comment: C: design matrix
17.2 years ago Holger Schwender ▴ 900
0
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0
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857
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Answer: A: SAM vs. sam2.20
17.3 years ago Holger Schwender ▴ 900
0
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0
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827
views
Getting associated genes from SNP anntotation files
SNP oligo SNP oligo
17.3 years ago Holger Schwender ▴ 900
0
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0
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447
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Answer: A: retrieving specific FDR value from SAM
17.4 years ago Holger Schwender ▴ 900
0
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1
reply
1.2k
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Comment: C: sam and the new version
17.4 years ago Holger Schwender ▴ 900
0
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1
reply
1.2k
views
Comment: C: sam and the new version
17.4 years ago Holger Schwender ▴ 900
0
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2
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1.2k
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Answer: A: sam and the new version
17.4 years ago Holger Schwender ▴ 900
0
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0
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1.9k
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Comment: C: how to see the content of a R function in a package?
17.5 years ago Holger Schwender ▴ 900
0
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0
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526
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Comment: C: siggenes 1.10 na.handling
17.6 years ago Holger Schwender ▴ 900
0
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0
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1.0k
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Answer: A: problem with list.siggenes in siggenes package
17.6 years ago Holger Schwender ▴ 900
0
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0
replies
508
views
Answer: A: siggenes
17.9 years ago Holger Schwender ▴ 900
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