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Answer: A: Filtering low intensity probes in microarray data
6.8 years ago Wolfgang Huber ★ 13k
5
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9.1k
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Answer: A: Volcanoplot with limma - RAW P-values or Adj.P-Values
6.8 years ago Wolfgang Huber ★ 13k
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946
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Answer: A: FourCSeq - errors in plotZScores
6.8 years ago Wolfgang Huber ★ 13k
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1.1k
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Answer: A: name of column in R
6.8 years ago Wolfgang Huber ★ 13k
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712
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Answer: A: How to extract a numeric matrix of the raw measurement values from the FCS file?
6.9 years ago Wolfgang Huber ★ 13k
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1
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11k
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Answer: A: R: error while reading .h5 files from R using rdhf5 package
6.9 years ago Wolfgang Huber ★ 13k
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0
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1.5k
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Answer: A: Save multiple plots into single pdf from Deseq2 analysis?
6.9 years ago Wolfgang Huber ★ 13k
2
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4.2k
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Answer: A: Application of Deseq2 to mass spec data
6.9 years ago Wolfgang Huber ★ 13k
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1.9k
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Answer: A: Nonspecific filtering of microarray data
6.9 years ago Wolfgang Huber ★ 13k
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1.1k
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Answer: A: AIC-like measure for DESeq2
7.0 years ago Wolfgang Huber ★ 13k
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1.5k
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Answer: C: Found consistent padj values for all the samples in DESeq2 R Package
7.0 years ago Wolfgang Huber ★ 13k
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1.6k
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Answer: A: Where to find open access microbiome data for case-control comparative study?
7.1 years ago Wolfgang Huber ★ 13k
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1
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2.7k
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Answer: A: Error in lfproc(x, y, weights = weights, cens = cens,... : newsplit: out of ver
7.1 years ago Wolfgang Huber ★ 13k
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1.4k
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Answer: A: Is the VST implemented in DESeq useful on time-series cell differentiation datas
7.1 years ago Wolfgang Huber ★ 13k
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0
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1.4k
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Answer: A: unusal expression level values after normalization in Affymetrix Microarray expe
7.1 years ago Wolfgang Huber ★ 13k
3
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1
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913
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Answer: A: statistical tests to show the specificity of a phenomenon (eg increase in H3K27m
7.2 years ago Wolfgang Huber ★ 13k
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0
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2.3k
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Answer: A: Unable to install DeSeq2 and EdgeR in ubuntu 16.04 , this is what happens when I
7.2 years ago Wolfgang Huber ★ 13k
0
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1
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1.2k
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Answer: A: Bug in vsn2 in package vsn?
7.2 years ago Wolfgang Huber ★ 13k
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0
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1.1k
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Answer: A: Questions about SomaticSignatures packages
7.2 years ago Wolfgang Huber ★ 13k
1
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1
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2.3k
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Answer: A: Best practices for converting adj matrix -> graphNEL
7.4 years ago Wolfgang Huber ★ 13k
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930
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Answer: A: how to change color of points log2foldchange>1
7.4 years ago Wolfgang Huber ★ 13k
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1.2k
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Answer: A: Bug in cleanUpPhenoData
7.4 years ago Wolfgang Huber ★ 13k
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0
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1.1k
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Answer: A: Fastest way to get the distances between pairs of graph nodes
7.4 years ago Wolfgang Huber ★ 13k
1
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1.0k
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Answer: A: Bioconductor packages for machine learning with RNAseq
7.5 years ago Wolfgang Huber ★ 13k
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1
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2.1k
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Answer: A: how install the package EBIamge on the software R 3.3.1?
7.6 years ago Wolfgang Huber ★ 13k
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1
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1.2k
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Answer: A: Transforming Variance Stabilised Counts to Relative Abundances
7.6 years ago Wolfgang Huber ★ 13k
4
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1
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1.8k
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Answer: A: Processing imaging data from high throughput compound screen with EBImage
7.6 years ago Wolfgang Huber ★ 13k
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1
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1.1k
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Answer: A: array Quality Metrics
7.6 years ago Wolfgang Huber ★ 13k
0
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1
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3.3k
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Answer: A: Variance stabilizing transformation seems not working on NGS (bacterial 16srRNA
7.7 years ago Wolfgang Huber ★ 13k
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0
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500
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Answer: A: DESEq gives adjusted pvalue as 1 for all regions
7.8 years ago Wolfgang Huber ★ 13k
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0
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5.4k
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Answer: A: adding margins around pheatmap plots
7.8 years ago Wolfgang Huber ★ 13k
2
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2
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1.6k
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Answer: A: DESeq2 interacting with agricolae
7.8 years ago Wolfgang Huber ★ 13k
1
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2
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3.8k
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Answer: A: arrayQualityMetrics does not complete successfully
7.8 years ago Wolfgang Huber ★ 13k
0
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1
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1.3k
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Answer: A: Variance estimation with DESeq2 and rLog transformation.
7.8 years ago Wolfgang Huber ★ 13k
1
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1
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1.2k
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Answer: A: Assesment of the number of signatures when using SomaticSignatures package
7.8 years ago Wolfgang Huber ★ 13k
0
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0
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1.1k
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Answer: A: More control parameters expected in lpsymphony?
7.9 years ago Wolfgang Huber ★ 13k
0
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0
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990
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Answer: A: Why are these two clustering patterns different?
7.9 years ago Wolfgang Huber ★ 13k
2
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1
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3.0k
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Answer: A: How is the mean-variance plot calculated?
8.0 years ago Wolfgang Huber ★ 13k
0
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1
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2.3k
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Answer: A: DESeq normalization seems to reverse the directionality of log2FoldChange - is t
8.0 years ago Wolfgang Huber ★ 13k
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0
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1.5k
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Answer: A: DEXSeq and shrinkage diagnostic : Comparison between results in plotDispEsts( dx
8.0 years ago Wolfgang Huber ★ 13k
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0
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1.3k
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Answer: A: interpreting dispersion estimation in dexseq
8.0 years ago Wolfgang Huber ★ 13k
0
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0
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4.8k
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Answer: A: PlotMA Filters for DeSEQ2 ; adjusting script
8.1 years ago Wolfgang Huber ★ 13k
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0
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2.5k
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Answer: A: making ExpressionSet from RGList via NChannelSet for use with 'sva'
8.2 years ago • updated 8.1 years ago Wolfgang Huber ★ 13k
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1.5k
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Answer: A: DESeq's estimateDispersions does not work
8.2 years ago Wolfgang Huber ★ 13k
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0
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1.6k
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Answer: A: SomaticSignatures: Interpretation of plotSamples graphs
8.2 years ago Wolfgang Huber ★ 13k
2
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1
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2.1k
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Answer: A: Problem when installing DESeq on MAC OS X
8.2 years ago Wolfgang Huber ★ 13k
0
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0
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1.2k
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Answer: A: code in supplementary 2 of DESeq
8.2 years ago Wolfgang Huber ★ 13k
1
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1
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12k
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Answer: A: DESeq2 FPKM normalization
8.3 years ago Wolfgang Huber ★ 13k
0
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0
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3.1k
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Answer: A: DESeq2 filter out my expression gene
8.3 years ago Wolfgang Huber ★ 13k
0
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0
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3.1k
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Answer: A: Cook´s distance on DESeq2
8.3 years ago Wolfgang Huber ★ 13k
825 results • Page 2 of 17
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