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0
votes
0
replies
297
views
Comment:
Comment: EBImage - Selecting parameters for x-ray seed size analysis
3 months ago
Wolfgang Huber
★ 13k
0
votes
0
replies
333
views
Comment:
Comment: DESeq2 interaction between one continuous variable and one categorical variable
4 months ago
Wolfgang Huber
★ 13k
0
votes
0
replies
332
views
News:
EMBO|EMBL Conference "AI and Biology"
EMBL
Heidelberg
AI
Conference
4 months ago
Wolfgang Huber
★ 13k
1
vote
0
replies
493
views
Job:
EMBL-EBI Data resources: Functional Genomics and Single Cell Biology Team Leader
JobPosting
7 months ago
Wolfgang Huber
★ 13k
0
votes
1
reply
536
views
Comment:
Comment: TPP2D::import2dDataset() does not return value
8 months ago
Wolfgang Huber
★ 13k
0
votes
0
replies
1.0k
views
Comment:
Comment: DESeq2 test for synergistic vs additive effects
8 months ago
Wolfgang Huber
★ 13k
0
votes
0
replies
1.0k
views
Comment:
Comment: DESeq2 test for synergistic vs additive effects
8 months ago
Wolfgang Huber
★ 13k
0
votes
1
reply
1.0k
views
Comment:
Comment: DESeq2 test for synergistic vs additive effects
9 months ago
Wolfgang Huber
★ 13k
0
votes
1
reply
709
views
Comment:
Comment: how to do splot with opls?
11 months ago
Wolfgang Huber
★ 13k
1
vote
0
replies
699
views
News:
Biological Data Science summer school 11-16 June in Brixen/Bressanone.
csama
11 months ago
Wolfgang Huber
★ 13k
2
votes
0
replies
1.2k
views
Comment:
Comment: DESEQ2 - What is the recommended workflow in terms of pre-filtering and counts n
11 months ago
Wolfgang Huber
★ 13k
2
votes
0
replies
691
views
Job:
Postdoc at EMBL: spatial and single-cell computational biology for precision oncology, based in Heidelberg, Germany
omics
Spatial
postdoc
12 months ago
Wolfgang Huber
★ 13k
0
votes
1
reply
705
views
Comment:
Comment: How to compute(calculate) rlog and vst provided from DESeq2
12 months ago
Wolfgang Huber
★ 13k
1
vote
1
reply
940
views
Comment:
Comment: Potential problem with independent filtering in DESeq2
13 months ago
Wolfgang Huber
★ 13k
0
votes
0
replies
1.2k
views
Tutorial:
Online workshop "Working with ChatGPT in R" 2023-03-09
chatgpt
programming
13 months ago
Wolfgang Huber
★ 13k
1
vote
0
replies
615
views
Answer:
Answer: Pseudobulk running all groups together vs subsetting first
13 months ago
Wolfgang Huber
★ 13k
1
vote
1
reply
488
views
Answer:
Answer: DE Analysis on cells from a patient derived mouse xenograft with high levels of
13 months ago
Wolfgang Huber
★ 13k
0
votes
1
reply
824
views
Comment:
Comment: Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
14 months ago
Wolfgang Huber
★ 13k
0
votes
0
replies
972
views
Comment:
Comment: Ascona Workshop “Biological systems: from first principles to data-driven model
14 months ago
Wolfgang Huber
★ 13k
0
votes
0
replies
702
views
Comment:
Comment: IHW for multiple regression
14 months ago
Wolfgang Huber
★ 13k
0
votes
1
reply
702
views
Comment:
Comment: IHW for multiple regression
14 months ago
Wolfgang Huber
★ 13k
0
votes
1
reply
559
views
Answer:
Answer: Question regarding averaging DESeq2 results.
19 months ago
Wolfgang Huber
★ 13k
0
votes
0
replies
519
views
Displaying large image stacks (e.g. from multiplexed immunohistochemistry) using shiny and EBImage
shiny
EBImage
20 months ago
Wolfgang Huber
★ 13k
0
votes
1
reply
3.5k
views
Answer:
Answer: Scaling for p.heatmap
21 months ago
Wolfgang Huber
★ 13k
3
votes
3
replies
1.9k
views
Extension to knitr/Rmarkdown to ignore only specific warnings (not all) in a chunk
rmarkdown
suppressWarning
warning
updated 13 months ago by
Mike Smith
★ 6.5k • written 2.3 years ago by
Wolfgang Huber
★ 13k
1
vote
1
reply
1.9k
views
Answer:
Answer: Extension to knitr/Rmarkdown to ignore only specific warnings (not all) in a chu
2.2 years ago
Wolfgang Huber
★ 13k
0
votes
0
replies
691
views
Answer:
Answer: Problem with ArrayQualityMetrics PCA plot
2.3 years ago
Wolfgang Huber
★ 13k
0
votes
0
replies
892
views
Answer:
Answer: cellHTS2 - normalization with BScore (performance
2.3 years ago
Wolfgang Huber
★ 13k
0
votes
2
replies
972
views
News:
Ascona Workshop “Biological systems: from first principles to data-driven modelling and back” 27. 3. - 1. 4. 2022
theory
modeling
statistics
ascona
Workshop
2.4 years ago • updated 14 months ago
Wolfgang Huber
★ 13k
2
votes
0
replies
1.7k
views
Answer:
Answer: How to obtain summary statistics for all Bioc releases
2.7 years ago
Wolfgang Huber
★ 13k
1
vote
0
replies
1.7k
views
Comment:
Comment: DESeq2 multiple conditions, time points and sample types
2.9 years ago
Wolfgang Huber
★ 13k
1
vote
1
reply
1.8k
views
Answer:
Answer: DEXSeq: What's the best way to map an exon counting bin, e.g. E002 to exon(s) or
2.9 years ago
Wolfgang Huber
★ 13k
1
vote
0
replies
1.4k
views
Comment:
Comment: Variance stabilising transformation to within given range
3.1 years ago
Wolfgang Huber
★ 13k
1
vote
0
replies
994
views
Answer:
Answer: R Package for Statistical Analysis of High Throughput Screening (HTS) Data
3.1 years ago
Wolfgang Huber
★ 13k
0
votes
1
reply
993
views
Answer:
Answer: Independent filtering of NGS data
3.2 years ago
Wolfgang Huber
★ 13k
0
votes
0
replies
1.1k
views
Answer:
Answer: Error log when I use biomaRt getBM
3.2 years ago
Wolfgang Huber
★ 13k
0
votes
0
replies
1.0k
views
Comment:
Comment: one stratum from vsn2
3.2 years ago
Wolfgang Huber
★ 13k
1
vote
1
reply
1.6k
views
Comment:
Comment: change all the negative value into positive value
3.3 years ago
Wolfgang Huber
★ 13k
3
votes
1
reply
1.6k
views
Answer:
Answer: change all the negative value into positive value
3.3 years ago
Wolfgang Huber
★ 13k
0
votes
0
replies
1.0k
views
Answer:
Answer: Normalisation of protein micro array data using VSN
3.4 years ago
Wolfgang Huber
★ 13k
1
vote
0
replies
910
views
Comment:
C: IHW: retain annotation columns in data when running `ihw(pvalue ~ covariate, dat
4.0 years ago
Wolfgang Huber
★ 13k
1
vote
1
reply
910
views
Comment:
C: IHW: retain annotation columns in data when running `ihw(pvalue ~ covariate, dat
4.0 years ago
Wolfgang Huber
★ 13k
1
vote
0
replies
25k
views
Answer:
A: lfcShrink doesn't work with contrasts
4.2 years ago
Wolfgang Huber
★ 13k
0
votes
0
replies
721
views
Job:
Computational 4D and single-cell expression analysis of animal development and regeneration
multi-omics
imaging
single-cell analysis
Job
4.8 years ago
Wolfgang Huber
★ 13k
0
votes
0
replies
864
views
Answer:
A: IHW scale of problem
4.8 years ago
Wolfgang Huber
★ 13k
5
votes
0
replies
1.1k
views
News:
Course announcement: Statistical Data Analysis for Genome Scale Biology (CSAMA) - Brixen, Italy 21-26 July 2019
csama
News
5.1 years ago • updated 5.0 years ago
Wolfgang Huber
★ 13k
1
vote
0
replies
782
views
Job:
Postdoc Position in Computational Single Cell Genetics / Statistical Modeling
job
huber
embl
Job
5.1 years ago
Wolfgang Huber
★ 13k
1
vote
0
replies
4.2k
views
Answer:
A: VOOM vs VSN vs log2 to transform proteome data before LIMMA analysis
5.1 years ago
Wolfgang Huber
★ 13k
1
vote
1
reply
3.5k
views
Comment:
C: DESeq2 vst normalization: Do I have a heteroscedasticity problem and if so, what
5.1 years ago
Wolfgang Huber
★ 13k
0
votes
1
reply
1.4k
views
Answer:
A: stringasfactor = F changes the output of pheatmap, why?
5.1 years ago
Wolfgang Huber
★ 13k
1,426 results • Page
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